RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 UBXN7O94888 489 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 PVRP15151 417 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 TYRP1P17643 537 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 ARF3P61204 181 aaPredicted RBP20.83■□□□□ 0.92
PTPN13-205ENST00000502971 ELOAQ14241 798 aaKnown RBP20.83■□□□□ 0.92
PTPN13-205ENST00000502971 C6orf52Q5T4I8 152 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 SLC48A1Q6P1K1 146 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 ABHD13Q7L211 337 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 C17orf82Q86X59 251 aaPredicted RBP20.83■□□□□ 0.92
PTPN13-205ENST00000502971 MAL2Q969L2 176 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 AMDHD1Q96NU7 426 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 ASPSCR1Q9BZE9 553 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 GLIPR2Q9H4G4 154 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 ADPRHL2Q9NX46 363 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 CES1P1Q9UKY3 287 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 EML5Q05BV3 1969 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 LILRA5A6NI73 299 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 MYO1GB0I1T2 1018 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 LMO7DNF2Z398 122 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 PGRMC2O15173 223 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 NOBOXO60393 691 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 SEMG1P04279 462 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 C21orf59P57076 290 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 SCARB2Q14108 478 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 SPDYE7PQ495Y7 208 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 FRMPD2BQ6IN97 320 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 OGFOD3Q6PK18 319 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 CCDC80Q76M96 950 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 TMBIM1Q969X1 311 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 BBS4Q96RK4 519 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 IL1RAPQ9NPH3 570 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 PRMT8Q9NR22 394 aaPredicted RBP20.82■□□□□ 0.92
PTPN13-205ENST00000502971 PHF11Q9UIL8 331 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 PADI4Q9UM07 663 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 ENTPD4Q9Y227 616 aa20.82■□□□□ 0.92
PTPN13-205ENST00000502971 LOC105369274A0A096LPK9 316 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 LOC102723532A0A0G2JNH3 316 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 GNGT2O14610 69 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 BCAT2O15382 392 aaPredicted RBP20.81■□□□□ 0.92
PTPN13-205ENST00000502971 LYNP07948 512 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 CDK9P50750 372 aaKnown RBP20.81■□□□□ 0.92
PTPN13-205ENST00000502971 NCBP2P52298 156 aaKnown RBP eCLIP20.81■□□□□ 0.92
PTPN13-205ENST00000502971 CASP9P55211 416 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 DSTNP60981 165 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 CDK6Q00534 326 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 EEF1A2Q05639 463 aaKnown RBP20.81■□□□□ 0.92
PTPN13-205ENST00000502971 NHSL2Q5HYW2 709 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 C18orf63Q68DL7 685 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 ZDHHC21Q8IVQ6 265 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 OR4N4Q8N0Y3 316 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 SVOPLQ8N434 492 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 N4BP2L2Q92802 583 aaPredicted RBP20.81■□□□□ 0.92
PTPN13-205ENST00000502971 MAPKAP1Q9BPZ7 522 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 GIMAP4Q9NUV9 329 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 PSME2Q9UL46 239 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 SNX11Q9Y5W9 270 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 TDRD6O60522 2096 aaKnown RBP20.81■□□□□ 0.92
PTPN13-205ENST00000502971 GLOD5A6NK44 160 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 EI24O14681 340 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 PRKRAO75569 313 aaKnown RBP20.81■□□□□ 0.92
PTPN13-205ENST00000502971 UBTFL6P0CB48 400 aaPredicted RBP20.81■□□□□ 0.92
PTPN13-205ENST00000502971 ARAFP10398 606 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 CCT3P49368 545 aaKnown RBP20.81■□□□□ 0.92
PTPN13-205ENST00000502971 CSNK1EP49674 416 aaKnown RBP20.81■□□□□ 0.92
PTPN13-205ENST00000502971 AFF3P51826 1226 aaKnown RBP20.81■□□□□ 0.92
PTPN13-205ENST00000502971 DMWDQ09019 674 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 BIRC2Q13490 618 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 MYBPC3Q14896 1274 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 TMEM214Q6NUQ4 689 aaKnown RBP20.81■□□□□ 0.92
PTPN13-205ENST00000502971 C6orf120Q7Z4R8 191 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 BMP8AQ7Z5Y6 402 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 TBC1D20Q96BZ9 403 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 HSH2DQ96JZ2 352 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 TMEM121BQ9BXQ6 578 aaPredicted RBP20.81■□□□□ 0.92
PTPN13-205ENST00000502971 PRDM9Q9NQV7 894 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 SEMA3GQ9NS98 782 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 SCOCQ9UIL1 159 aa20.81■□□□□ 0.92
PTPN13-205ENST00000502971 SUV39H1O43463 412 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 LAMTOR5O43504 91 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 B3GALT2O43825 422 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 ERAL1O75616 437 aaKnown RBP20.8■□□□□ 0.92
PTPN13-205ENST00000502971 NR2F6P10588 404 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 GPC1P35052 558 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 BUD31P41223 144 aaPredicted RBP20.8■□□□□ 0.92
PTPN13-205ENST00000502971 MAGEA8P43361 318 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 PPP1CAP62136 330 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 TXNL4AP83876 142 aaKnown RBP20.8■□□□□ 0.92
PTPN13-205ENST00000502971 CEBPEQ15744 281 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 CYBRD1Q53TN4 286 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 UGT2A3Q6UWM9 527 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 TMEM64Q6YI46 380 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 ZNF438Q7Z4V0 828 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 ZDHHC13Q8IUH4 622 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 NFKBIDQ8NI38 313 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 ZCCHC10Q8TBK6 192 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 SDCCAG3Q96C92 435 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 SLC38A3Q99624 504 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 MS4A12Q9NXJ0 267 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 ANGPT4Q9Y264 503 aa20.8■□□□□ 0.92
PTPN13-205ENST00000502971 DLGAP1O14490 977 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms