RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 SIRPB2Q5JXA9 342 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 OTUD1Q5VV17 481 aaPredicted RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 TMEM268Q5VZI3 342 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 PM20D1Q6GTS8 502 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 FAM45BPQ6NSW5 357 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 ZFP1Q6P2D0 407 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 TTC33Q6PID6 262 aaPredicted RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 B3GNT6Q6ZMB0 384 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 FRA10AC1Q70Z53 315 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 KBTBD6Q86V97 674 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 WDR5BQ86VZ2 330 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 RALGPS2Q86X27 583 aaPredicted RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 CLVS1Q8IUQ0 354 aaPredicted RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 PGAM4Q8N0Y7 254 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 LSMEM2Q8N112 164 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 ZNF786Q8N393 782 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 CPXM2Q8N436 756 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 FBXO39Q8N4B4 442 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 CARNMT1Q8N4J0 409 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 DPP10Q8N608 796 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 CPSF7Q8N684 471 aaKnown RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 ATAD1Q8NBU5 361 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 DNAAF1Q8NEP3 725 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 LPCAT1Q8NF37 534 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 TSPAN14Q8NG11 270 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 OR4N2Q8NGD1 307 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 OR4L1Q8NH43 312 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 STAG3L4Q8TBR4 150 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 METTL6Q8TCB7 284 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 FAM45AQ8TCE6 357 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 SPPL2BQ8TCT7 592 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 NAT14Q8WUY8 206 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 SKA2Q8WVK7 121 aaPredicted RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 RSPH1Q8WYR4 309 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 NT5C3BQ969T7 300 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 ESAMQ96AP7 390 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 COQ8BQ96D53 544 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 DGCR14Q96DF8 476 aaKnown RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 HMCESQ96FZ2 354 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 DNAJC1Q96KC8 554 aaKnown RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 B3GALT6Q96L58 329 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 SERPINB11Q96P15 392 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 SIGLEC11Q96RL6 698 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 ACOX2Q99424 681 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 ZBTB18Q99592 522 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 GPR22Q99680 433 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 OLFM1Q99784 485 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 CIB1Q99828 191 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 EGFL8Q99944 293 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 TREX2Q9BQ50 279 aaPredicted RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 SLC25A23Q9BV35 468 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 THUMPD3Q9BV44 507 aaKnown RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 SPATA16Q9BXB7 569 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 ITPAQ9BY32 194 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 MRPS26Q9BYN8 205 aaKnown RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 SLC25A51Q9H1U9 297 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 HIPK3Q9H422 1215 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 FBXO44Q9H4M3 255 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 FBRSL1Q9HCM7 1045 aaKnown RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 WDR6Q9NNW5 1121 aaKnown RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 OLA1Q9NTK5 396 aaKnown RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 TRNAU1APQ9NX07 287 aaKnown RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 PKD2L2Q9NZM6 624 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 TBC1D14Q9P2M4 693 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 GALPQ9UBC7 116 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 UXTQ9UBK9 157 aaPredicted RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 SUN2Q9UH99 717 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 TRMT6Q9UJA5 497 aaKnown RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 FBXO9Q9UK97 447 aaPredicted RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 ABT1Q9ULW3 272 aaKnown RBP2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 RAB26Q9ULW5 256 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 CAMK2AQ9UQM7 478 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 LAMP3Q9UQV4 416 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 ZNF711Q9Y462 761 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 ARL5AQ9Y689 179 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 V9GYQ6 96 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 LOXHD1Q8IVV2 1947 aa2.99□□□□□ -1.93
CDC42SE2-205ENST00000502840 SF3B1O75533 1304 aaKnown RBP eCLIP2.98□□□□□ -1.931e-7■■■■■ 26.8
CDC42SE2-205ENST00000502840 TRBV5-3A0A0A0MS03 114 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 C15orf38-AP3S2A0A0A6YYH1 394 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 TEX13CA0A0J9YWL9 993 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 A0A0J9YYE9 177 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 SMIM31A0A1B0GVY4 71 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 MBLAC1A4D2B0 266 aaPredicted RBP2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 A8MT66 165 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 HHLA1C9JL84 531 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 H3BMM5 538 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 H3BNX3 289 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 I6L893 689 aaPredicted RBP2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 HAS3O00219 553 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 CDC7O00311 574 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 SDHDO14521 159 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 ADAM10O14672 748 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 INPP4BO15327 924 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 SLC7A4O43246 635 aa2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 DENRO43583 198 aaKnown RBP2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 TLX3O43711 291 aaPredicted RBP2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 DUSP11O75319 330 aaKnown RBP2.98□□□□□ -1.93
CDC42SE2-205ENST00000502840 BCAS2O75934 225 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms