RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SFT2D3Q587I9 215 aa23.55■■□□□ 1.36
LSM6-202ENST00000502781 ACSM2BQ68CK6 577 aa23.55■■□□□ 1.36
LSM6-202ENST00000502781 GALNT16Q8N428 558 aa23.55■■□□□ 1.36
LSM6-202ENST00000502781 RAB3IL1Q8TBN0 382 aa23.55■■□□□ 1.36
LSM6-202ENST00000502781 TWIST2Q8WVJ9 160 aa23.55■■□□□ 1.36
LSM6-202ENST00000502781 RPF2Q9H7B2 306 aaKnown RBP23.55■■□□□ 1.36
LSM6-202ENST00000502781 ZNF160Q9HCG1 818 aa23.55■■□□□ 1.36
LSM6-202ENST00000502781 FIS1Q9Y3D6 152 aa23.55■■□□□ 1.36
LSM6-202ENST00000502781 RAP2CQ9Y3L5 183 aa23.55■■□□□ 1.36
LSM6-202ENST00000502781 PCDHGA9Q9Y5G4 932 aaKnown RBP23.55■■□□□ 1.36
LSM6-202ENST00000502781 SCN2AQ99250 2005 aa23.55■■□□□ 1.36
LSM6-202ENST00000502781 ARHGAP10A1A4S6 786 aa23.54■■□□□ 1.36
LSM6-202ENST00000502781 SLC28A1O00337 649 aa23.54■■□□□ 1.36
LSM6-202ENST00000502781 AIFM1O95831 613 aa23.54■■□□□ 1.36
LSM6-202ENST00000502781 MAPK12P53778 367 aa23.54■■□□□ 1.36
LSM6-202ENST00000502781 OR4D2P58180 307 aa23.54■■□□□ 1.36
LSM6-202ENST00000502781 TRA2BP62995 288 aaKnown RBP23.54■■□□□ 1.36
LSM6-202ENST00000502781 IMPG1Q17R60 797 aa23.54■■□□□ 1.36
LSM6-202ENST00000502781 OR2T11Q8NH01 316 aa23.54■■□□□ 1.36
LSM6-202ENST00000502781 TANKQ92844 425 aa23.54■■□□□ 1.36
LSM6-202ENST00000502781 ANKRD9Q96BM1 317 aaPredicted RBP23.54■■□□□ 1.36
LSM6-202ENST00000502781 TM4SF18Q96CE8 201 aa23.54■■□□□ 1.36
LSM6-202ENST00000502781 ACBD3Q9H3P7 528 aa23.54■■□□□ 1.36
LSM6-202ENST00000502781 PIEZO2Q9H5I5 2752 aa23.54■■□□□ 1.36
LSM6-202ENST00000502781 PRKRAO75569 313 aaKnown RBP23.53■■□□□ 1.36
LSM6-202ENST00000502781 SEC24DO94855 1032 aaPredicted RBP23.53■■□□□ 1.36
LSM6-202ENST00000502781 NR2F6P10588 404 aa23.53■■□□□ 1.36
LSM6-202ENST00000502781 NEFHP12036 1026 aa23.53■■□□□ 1.36
LSM6-202ENST00000502781 KCNAB2Q13303 367 aa23.53■■□□□ 1.36
LSM6-202ENST00000502781 KIAA0040Q15053 153 aa23.53■■□□□ 1.36
LSM6-202ENST00000502781 XKR7Q5GH72 579 aa23.53■■□□□ 1.36
LSM6-202ENST00000502781 AGR3Q8TD06 166 aa23.53■■□□□ 1.36
LSM6-202ENST00000502781 ABHD17AQ96GS6 310 aa23.53■■□□□ 1.36
LSM6-202ENST00000502781 LPAR4Q99677 370 aa23.53■■□□□ 1.36
LSM6-202ENST00000502781 TLN1Q9Y490 2541 aaKnown RBP23.53■■□□□ 1.36
LSM6-202ENST00000502781 MKRN2OSH3BPM6 223 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 PIP5K1BO14986 540 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 FGF17O60258 216 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 LDB3O75112 727 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 SNNO75324 88 aaPredicted RBP23.52■■□□□ 1.36
LSM6-202ENST00000502781 TIA1P31483 386 aaKnown RBP eCLIP23.52■■□□□ 1.36
LSM6-202ENST00000502781 SPDYAQ5MJ70 313 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 NDUFAF5Q5TEU4 345 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 PLAG1Q6DJT9 500 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 PAPD4Q6PIY7 484 aaKnown RBP23.52■■□□□ 1.36
LSM6-202ENST00000502781 CLNKQ7Z7G1 428 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 ZNF781Q8N8C0 355 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 C7orf57Q8NEG2 295 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 FDCSPQ8NFU4 85 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 FAM76AQ8TAV0 307 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 BBC3Q96PG8 261 aaPredicted RBP23.52■■□□□ 1.36
LSM6-202ENST00000502781 ILKAPQ9H0C8 392 aaPredicted RBP23.52■■□□□ 1.36
LSM6-202ENST00000502781 RGS14O43566 566 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 PCDH7O60245 1069 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 GUCY1B2O75343 617 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 SERPINA7P05543 415 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 LINC00032P0C843 101 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 ICAM2P13598 275 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 PPP2R1BP30154 601 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 BTKQ06187 659 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 SERTAD2Q14140 314 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 LY6DQ14210 128 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 MYBPC3Q14896 1274 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 TERF2Q15554 542 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 TCTN3Q6NUS6 607 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 RIPOR1Q6ZS17 1223 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 TRIM42Q8IWZ5 723 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 PARP9Q8IXQ6 854 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 AMER2Q8N7J2 671 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 DNAJB14Q8TBM8 379 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 UCN3Q969E3 161 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 CCT7Q99832 543 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 ALOXE3Q9BYJ1 711 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 WDR41Q9HAD4 459 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 VTI1BQ9UEU0 232 aa23.52■■□□□ 1.36
LSM6-202ENST00000502781 WASHC1A8K0Z3 465 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 KLF11O14901 512 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 PRR35P0CG20 571 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 SFTPCP11686 197 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 ACTN3Q08043 901 aaPredicted RBP23.51■■□□□ 1.35
LSM6-202ENST00000502781 OR52E8Q6IFG1 317 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 KBTBD2Q8IY47 623 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 KIRREL3Q8IZU9 778 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 NFAM1Q8NET5 270 aaPredicted RBP23.51■■□□□ 1.35
LSM6-202ENST00000502781 FCRL1Q96LA6 429 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 SLC25A23Q9BV35 468 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 NUDT9Q9BW91 350 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 LHPPQ9H008 270 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 ZNF552Q9H707 407 aaPredicted RBP23.51■■□□□ 1.35
LSM6-202ENST00000502781 MANSC1Q9H8J5 431 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 THAP1Q9NVV9 213 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 C1orf109Q9NX04 203 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 CES1P1Q9UKY3 287 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 PPIEQ9UNP9 301 aaKnown RBP23.51■■□□□ 1.35
LSM6-202ENST00000502781 PCDHA9Q9Y5H5 950 aa23.51■■□□□ 1.35
LSM6-202ENST00000502781 SAGE2PA6NJ88 616 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 A6NL46 340 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 LSM1O15116 133 aaKnown RBP23.5■■□□□ 1.35
LSM6-202ENST00000502781 PGRMC2O15173 223 aa23.5■■□□□ 1.35
LSM6-202ENST00000502781 GPR75O95800 540 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms