RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 KIAA1324LA8MWY0 1029 aaPredicted RBP12.84□□□□□ -0.35
CCDC58-207ENST00000498466 CYR61O00622 381 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 H2AFYO75367 372 aaKnown RBP12.84□□□□□ -0.35
CCDC58-207ENST00000498466 AHSGP02765 367 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 RFPL3SP0C7P2 107 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 GABRB3P28472 473 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 TRPC1P48995 793 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 LIM2P55344 173 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 WNT3P56703 355 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 ASPHQ12797 758 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 RCN2Q14257 317 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 EFTUD2Q15029 972 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCDC58-207ENST00000498466 ACSF3Q4G176 576 aaPredicted RBP12.84□□□□□ -0.35
CCDC58-207ENST00000498466 LCE2DQ5TA82 110 aaPredicted RBP12.84□□□□□ -0.35
CCDC58-207ENST00000498466 PRAMEF20Q5VT98 475 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 SHEQ5VZ18 495 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 SLC22A10Q63ZE4 541 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 TRIM40Q6P9F5 258 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 TMIGD1Q6UXZ0 262 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 MAATS1Q7Z4T9 603 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 KRTAP1-3Q8IUG1 177 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 NEIL3Q8TAT5 605 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 LINC01560Q8TB33 94 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 SIGLEC10Q96LC7 697 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 JSRP1Q96MG2 331 aaPredicted RBP12.84□□□□□ -0.35
CCDC58-207ENST00000498466 QRFPRQ96P65 431 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 SERINC2Q96SA4 455 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 YIPF4Q9BSR8 244 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 REXO4Q9GZR2 422 aaKnown RBP12.84□□□□□ -0.35
CCDC58-207ENST00000498466 COPS7BQ9H9Q2 264 aaPredicted RBP12.84□□□□□ -0.35
CCDC58-207ENST00000498466 ZFP64Q9NPA5 681 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 BEX4Q9NWD9 120 aaPredicted RBP12.84□□□□□ -0.35
CCDC58-207ENST00000498466 DAPP1Q9UN19 280 aa12.84□□□□□ -0.35
CCDC58-207ENST00000498466 C15orf38-AP3S2A0A0A6YYH1 394 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 CLCA1A8K7I4 914 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 AHRRA9YTQ3 701 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 KDM4EB2RXH2 506 aaPredicted RBP12.83□□□□□ -0.36
CCDC58-207ENST00000498466 EPPINO95925 133 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 IL2RAP01589 272 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 CCDC175P0C221 793 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 C1GALT1C1LP0DN25 315 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 GNAZP19086 355 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 CD53P19397 219 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 CERS1P27544 350 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 CEACAM8P31997 349 aaPredicted RBP12.83□□□□□ -0.36
CCDC58-207ENST00000498466 HPDP32754 393 aaPredicted RBP12.83□□□□□ -0.36
CCDC58-207ENST00000498466 MAGEA3P43357 314 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 MTTPP55157 894 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 SERTAD2Q14140 314 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 SLBPQ14493 270 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCDC58-207ENST00000498466 CRYMQ14894 314 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 POU4F3Q15319 338 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 MPEG1Q2M385 716 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 PIGGQ5H8A4 983 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 SBSNQ6UWP8 590 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 LACC1Q8IV20 430 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 LRRN4CLQ8ND94 238 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 OR2L5Q8NG80 312 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 SLC22A8Q8TCC7 542 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 KIAA1191Q96A73 305 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 EGFL8Q99944 293 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 REPIN1Q9BWE0 567 aaKnown RBP12.83□□□□□ -0.36
CCDC58-207ENST00000498466 ACKR4Q9NPB9 350 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 IKZF3Q9UKT9 509 aa12.83□□□□□ -0.36
CCDC58-207ENST00000498466 ANKDD1BA6NHY2 528 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 EEF1E1-BLOC1S5C9J1V9 151 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 EEF1E1O43324 174 aaKnown RBP12.82□□□□□ -0.36
CCDC58-207ENST00000498466 LDB3O75112 727 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 WDR47O94967 919 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 ETHE1O95571 254 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 LY6G6DO95868 133 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 PGAM1P18669 254 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 GSTM2P28161 218 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 PCSK6P29122 969 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 TIMP3P35625 211 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 ZNF136P52737 540 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 ID2Q02363 134 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 TBL3Q12788 808 aaKnown RBP12.82□□□□□ -0.36
CCDC58-207ENST00000498466 PPP1R3AQ16821 1122 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 ZNF791Q3KP31 576 aaPredicted RBP12.82□□□□□ -0.36
CCDC58-207ENST00000498466 POMZP3Q6PJE2 187 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 ADGRD1Q6QNK2 874 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 KRT78Q8N1N4 520 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 LRRC25Q8N386 305 aaPredicted RBP12.82□□□□□ -0.36
CCDC58-207ENST00000498466 VWA5B2Q8N398 1253 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 FAM13CQ8NE31 585 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 PAQR8Q8TEZ7 354 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 HSPBAP1Q96EW2 488 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 EPB41L4BQ9H329 900 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 SH2D2AQ9NP31 389 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 QPCTLQ9NXS2 382 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 VWA7Q9Y334 891 aa12.82□□□□□ -0.36
CCDC58-207ENST00000498466 LRRC3CA6NJW4 275 aa12.81□□□□□ -0.36
CCDC58-207ENST00000498466 ARHGEF9O43307 516 aa12.81□□□□□ -0.36
CCDC58-207ENST00000498466 CLEC3AO75596 197 aa12.81□□□□□ -0.36
CCDC58-207ENST00000498466 GOSR1O95249 250 aa12.81□□□□□ -0.36
CCDC58-207ENST00000498466 COX7A2P14406 83 aa12.81□□□□□ -0.36
CCDC58-207ENST00000498466 GDF1P27539 372 aa12.81□□□□□ -0.36
CCDC58-207ENST00000498466 CXCR5P32302 372 aa12.81□□□□□ -0.36
CCDC58-207ENST00000498466 AGFG1P52594 562 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms