RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 MSLNLQ96KJ4 702 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 SERPINB11Q96P15 392 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 ABCC13Q9NSE7 274 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 SPATA6Q9NWH7 488 aaPredicted RBP12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 ARL15Q9NXU5 204 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 CDH10Q9Y6N8 788 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 LANCL1O43813 399 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 SEMG1P04279 462 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 CBX5P45973 191 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 ACLYP53396 1101 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 CLLU1Q5K131 121 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 ALKAL1Q6UXT8 129 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 GPR155Q7Z3F1 870 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 GPAT4Q86UL3 456 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 MARCH9Q86YJ5 346 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 C3orf58Q8NDZ4 430 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 DUSP18Q8NEJ0 188 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 RAET1EQ8TD07 263 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 KCNJ9Q92806 393 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 C12orf66Q96MD2 445 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 ZSWIM3Q96MP5 696 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 GSX2Q9BZM3 304 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 HEXA-AS1Q9H8Q6 139 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 FANCFQ9NPI8 374 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 MAP4K5Q9Y4K4 846 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 A0A0G2JMZ2 1700 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 LRRC37A2A6NM11 1700 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 C2orf78A6NCI8 922 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 TMEM88BA6NKF7 163 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 TRBC1P01850 177 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 TBX4P57082 545 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 NTRK2Q16620 822 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 NDUFAF5Q5TEU4 345 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 FBXL22Q6P050 247 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 ZNF730Q6ZMV8 503 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 KIAA0907Q7Z7F0 614 aaPredicted RBP12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 UCN3Q969E3 161 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 KLHL15Q96M94 604 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 OR51J1Q9H342 316 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 ENAMQ9NRM1 1142 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 CD8B2A6NJW9 211 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 F8W810 466 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 YY2O15391 372 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 CD8BP10966 210 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 PRPS2P11908 318 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 DRD5P21918 477 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 SOAT1P35610 550 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 ATP12AP54707 1039 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 TSPAN5P62079 268 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 ZNF273Q14593 569 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 NOXRED1Q6NXP6 359 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 LRFN4Q6PJG9 635 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 UNC5DQ6UXZ4 953 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 MEX3DQ86XN8 651 aaKnown RBP12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 GPALPP1Q8IXQ4 340 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 PGBD3Q8N328 593 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 CLDN22Q8N7P3 220 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 POP5Q969H6 163 aaKnown RBP12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 C11orf24Q96F05 449 aaPredicted RBP12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 ART5Q96L15 291 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 CXorf58Q96LI9 332 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 CINPQ9BW66 212 aaPredicted RBP12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 SLC29A3Q9BZD2 475 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 PCDHB16Q9NRJ7 776 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 TRPM5Q9NZQ8 1165 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 TEX13CA0A0J9YWL9 993 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 hCG_1807616A0A1W2PRN6 198 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 SH3D21A4FU49 640 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 GABRR3A8MPY1 467 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 ZNF865P0CJ78 1059 aaPredicted RBP12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 NR2F6P10588 404 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 GPX2P18283 190 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 PCSK1P29120 753 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 PBX3P40426 434 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 ETV5P41161 510 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 SELENOWP63302 87 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 RIN1Q13671 783 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 ZNF628Q5EBL2 1059 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 COX20Q5RI15 118 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 HDDC2Q7Z4H3 204 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 ADGRG3Q86Y34 549 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 OR4K1Q8NGD4 311 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 DNAJB8Q8NHS0 232 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 NXPE2Q96DL1 559 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 ZNF416Q9BWM5 594 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 NLNQ9BYT8 704 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 OSER1Q9NX31 292 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 COPS3Q9UNS2 423 aa12.48□□□□□ -0.41
GAPVD1-220ENST00000497580 SH3BP5O60239 455 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 RHOQP17081 205 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 STK19P49842 368 aaPredicted RBP12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 GAB1Q13480 694 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 MS4A13Q5J8X5 152 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 ZNF852Q6ZMS4 543 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 UMODL1-AS1Q8N2C9 162 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 FAM181AQ8N9Y4 354 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 MYO19Q96H55 970 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 MAPKAP1Q9BPZ7 522 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 C16orf70Q9BSU1 422 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 ADGRE3Q9BY15 652 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms