RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 PRSS58Q8IYP2 241 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 C10orf82Q8WW14 230 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 KCNE4Q8WWG9 221 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 BRINP2Q9C0B6 783 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 GPN2Q9H9Y4 310 aaPredicted RBP20.48■□□□□ 0.87
C9orf3-222ENST00000496567 PRTFDC1Q9NRG1 225 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 PSME2Q9UL46 239 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 TCFL5Q9UL49 500 aa20.48■□□□□ 0.87
C9orf3-222ENST00000496567 RRP9O43818 475 aaKnown RBP20.47■□□□□ 0.87
C9orf3-222ENST00000496567 PRMT3O60678 531 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 CTNSO60931 367 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 HEXBP07686 556 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 DDCP20711 480 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 RPL3P39023 403 aaKnown RBP20.47■□□□□ 0.87
C9orf3-222ENST00000496567 ALDH9A1P49189 494 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 CLN3Q13286 438 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 PTGR1Q14914 329 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 TMEM52Q8NDY8 209 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 C7orf57Q8NEG2 295 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 CLHC1Q8NHS4 586 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 CCT8L2Q96SF2 557 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 DPH1Q9BZG8 443 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 MIEF1Q9NQG6 463 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 WDR70Q9NW82 654 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 EHD3Q9NZN3 535 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 GPR45Q9Y5Y3 372 aa20.47■□□□□ 0.87
C9orf3-222ENST00000496567 IDSB3KWA1 339 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 TLX3O43711 291 aaPredicted RBP20.46■□□□□ 0.87
C9orf3-222ENST00000496567 FAM107AO95990 144 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 PRPS1L1P21108 318 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 HNRNPFP52597 415 aaKnown RBP20.46■□□□□ 0.87
C9orf3-222ENST00000496567 EMP2P54851 167 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 CLDN8P56748 225 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 STX1BP61266 288 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 SLC13A2Q13183 592 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 SLC48A1Q6P1K1 146 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 RIPOR1Q6ZS17 1223 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 SHISA6Q6ZSJ9 500 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 R3HCC1LQ7Z5L2 792 aaKnown RBP20.46■□□□□ 0.87
C9orf3-222ENST00000496567 LAPTM4BQ86VI4 370 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 PLPP5Q8NEB5 264 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 STARD8Q92502 1023 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 MTERF3Q96E29 417 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 CRB3Q9BUF7 120 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 TMEM121BQ9BXQ6 578 aaPredicted RBP20.46■□□□□ 0.87
C9orf3-222ENST00000496567 DPY30Q9C005 99 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 VN1R1Q9GZP7 353 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 RABEP2Q9H5N1 569 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 REEP4Q9H6H4 257 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 HEY2Q9UBP5 337 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 C3orf18Q9UK00 162 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 G3BP2Q9UN86 482 aaKnown RBP20.46■□□□□ 0.87
C9orf3-222ENST00000496567 NUP210LQ5VU65 1888 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 SYNDIG1LA6NDD5 238 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 GLOD5A6NK44 160 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 PGRMC2O15173 223 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 PRKRAO75569 313 aaKnown RBP20.46■□□□□ 0.87
C9orf3-222ENST00000496567 LRATO95237 230 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 DDX5P17844 614 aaKnown RBP20.46■□□□□ 0.87
C9orf3-222ENST00000496567 NCF2P19878 526 aaPredicted RBP20.46■□□□□ 0.87
C9orf3-222ENST00000496567 HPCAL1P37235 193 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 MC1RQ01726 317 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 ACTN3Q08043 901 aaPredicted RBP20.46■□□□□ 0.87
C9orf3-222ENST00000496567 PIGWQ7Z7B1 504 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 DNAJB14Q8TBM8 379 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 GFM2Q969S9 779 aaKnown RBP20.46■□□□□ 0.87
C9orf3-222ENST00000496567 NAF1Q96HR8 494 aaKnown RBP20.46■□□□□ 0.87
C9orf3-222ENST00000496567 MARK4Q96L34 752 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 PTCHD1Q96NR3 888 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 CATSPER2Q96P56 530 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 ACTL8Q9H568 366 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 SEMA3GQ9NS98 782 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 MRGBPQ9NV56 204 aa20.46■□□□□ 0.87
C9orf3-222ENST00000496567 PCDH17O14917 1159 aa20.45■□□□□ 0.86
C9orf3-222ENST00000496567 AKAP10O43572 662 aa20.45■□□□□ 0.86
C9orf3-222ENST00000496567 IGHEP01854 428 aa20.45■□□□□ 0.86
C9orf3-222ENST00000496567 F8A1P23610 371 aa20.45■□□□□ 0.86
C9orf3-222ENST00000496567 C21orf58P58505 322 aa20.45■□□□□ 0.86
C9orf3-222ENST00000496567 BTG2P78543 158 aa20.45■□□□□ 0.86
C9orf3-222ENST00000496567 RHAGQ02094 409 aa20.45■□□□□ 0.86
C9orf3-222ENST00000496567 STX4Q12846 297 aa20.45■□□□□ 0.86
C9orf3-222ENST00000496567 BIKQ13323 160 aa20.45■□□□□ 0.86
C9orf3-222ENST00000496567 PDCD4Q53EL6 469 aaKnown RBP20.45■□□□□ 0.86
C9orf3-222ENST00000496567 SCUBE1Q8IWY4 988 aa20.45■□□□□ 0.86
C9orf3-222ENST00000496567 MMP21Q8N119 569 aa20.45■□□□□ 0.86
C9orf3-222ENST00000496567 METTL21AQ8WXB1 218 aa20.45■□□□□ 0.86
C9orf3-222ENST00000496567 ZNF764Q96H86 408 aaPredicted RBP20.45■□□□□ 0.86
C9orf3-222ENST00000496567 PRPF18Q99633 342 aaKnown RBP20.45■□□□□ 0.86
C9orf3-222ENST00000496567 SDR39U1Q9NRG7 319 aaPredicted RBP20.45■□□□□ 0.86
C9orf3-222ENST00000496567 CES1P1Q9UKY3 287 aa20.45■□□□□ 0.86
C9orf3-222ENST00000496567 CEP295Q9C0D2 2601 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 TBX19O60806 448 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 GPR75O95800 540 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 RECKO95980 971 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 FURINP09958 794 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 LIFP15018 202 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 PIK3R1P27986 724 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 MRPL19P49406 292 aaKnown RBP20.44■□□□□ 0.86
C9orf3-222ENST00000496567 ATP4BP51164 291 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 CLNS1AP54105 237 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms