RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 CAPRIN1Q14444 709 aaKnown RBP8.16□□□□□ -1.1
U2AF1-212ENST00000496462 RGS9BPQ6ZS82 235 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 OR4N4Q8N0Y3 316 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 OR4K3Q96R72 315 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 GAL3ST4Q96RP7 486 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 HBEGFQ99075 208 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 OR8D2Q9GZM6 311 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 EFCAB1Q9HAE3 211 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 TMEM45AQ9NWC5 275 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 KLHL28Q9NXS3 571 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 SEMA5BQ9P283 1151 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 EMCNQ9ULC0 261 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 A0A1W2PPV9 198 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 A8MUI8 341 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 NR5A2O00482 541 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 OR7A17O14581 309 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 WISP3O95389 354 aaPredicted RBP8.16□□□□□ -1.1
U2AF1-212ENST00000496462 ETV4P43268 484 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 PRKAG1P54619 331 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 HKDC1Q2TB90 917 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 PRTGQ2VWP7 1150 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 TMEM214Q6NUQ4 689 aaKnown RBP8.16□□□□□ -1.1
U2AF1-212ENST00000496462 ZNF621Q6ZSS3 439 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 FAM47BQ8NA70 645 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 OR52E6Q96RD3 313 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 SPATA5L1Q9BVQ7 753 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 TRIM15Q9C019 465 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 SLC6A16Q9GZN6 736 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.16□□□□□ -1.1
U2AF1-212ENST00000496462 SOX17Q9H6I2 414 aaPredicted RBP8.16□□□□□ -1.1
U2AF1-212ENST00000496462 CAAP1Q9H8G2 361 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 Q9N2J8 555 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 MYNNQ9NPC7 610 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 FAM120CQ9NX05 1096 aaKnown RBP8.16□□□□□ -1.1
U2AF1-212ENST00000496462 TAS2R9Q9NYW1 312 aa8.16□□□□□ -1.1
U2AF1-212ENST00000496462 TMEM184BQ9Y519 407 aaPredicted RBP8.16□□□□□ -1.1
U2AF1-212ENST00000496462 TDRD6O60522 2096 aaKnown RBP8.16□□□□□ -1.1
U2AF1-212ENST00000496462 IDSB3KWA1 339 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 CTSVO60911 334 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 LRATO95237 230 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 KCNH1O95259 989 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 PRKAR1AP10644 381 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 IL12BP29460 328 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 DCAF7P61962 342 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 TIAL1Q01085 375 aaKnown RBP eCLIP8.15□□□□□ -1.1
U2AF1-212ENST00000496462 ZNF267Q14586 743 aaPredicted RBP8.15□□□□□ -1.1
U2AF1-212ENST00000496462 ZNF658BQ4V348 819 aaPredicted RBP8.15□□□□□ -1.1
U2AF1-212ENST00000496462 NDUFAF5Q5TEU4 345 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 XKR5Q6UX68 686 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 KRT73Q86Y46 540 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 TICAM1Q8IUC6 712 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 ZNF740Q8NDX6 193 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 OR2Y1Q8NGV0 311 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 OR5P2Q8WZ92 322 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 ZNF354BQ96LW1 612 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 PANX1Q96RD7 426 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 ZDHHC2Q9UIJ5 367 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 CROTQ9UKG9 612 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 BBIP1A8MTZ0 92 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 RFXANKO14593 260 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 PRICKLE3O43900 615 aaPredicted RBP8.15□□□□□ -1.1
U2AF1-212ENST00000496462 ABCB1P08183 1280 aaPredicted RBP8.15□□□□□ -1.1
U2AF1-212ENST00000496462 ZGLP1P0C6A0 271 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 EPHA3P29320 983 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 PPP1CAP62136 330 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 NFYCQ13952 458 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 FRMPD2BQ6IN97 320 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 JMJD6Q6NYC1 403 aaPredicted RBP8.15□□□□□ -1.1
U2AF1-212ENST00000496462 C16orf62Q7Z3J2 963 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 HPS6Q86YV9 775 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 OR4A15Q8NGL6 344 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 C16orf78Q8WTQ4 265 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 CT55Q8WUE5 264 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 GFM2Q969S9 779 aaKnown RBP8.15□□□□□ -1.1
U2AF1-212ENST00000496462 VMP1Q96GC9 406 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 RBCK1Q9BYM8 510 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 ADAM21Q9UKJ8 722 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 ZNF232Q9UNY5 417 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 AHCTF1Q8WYP5 2266 aa8.15□□□□□ -1.1
U2AF1-212ENST00000496462 RTCAO00442 366 aaKnown RBP8.15□□□□□ -1.11
U2AF1-212ENST00000496462 SLC22A2O15244 555 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 IL3P08700 152 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 ALOX5P09917 674 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 MASP1P48740 699 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 TAF11Q15544 211 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 C6orf136Q5SQH8 315 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 UBAP2Q5T6F2 1119 aaKnown RBP8.15□□□□□ -1.11
U2AF1-212ENST00000496462 INTS11Q5TA45 600 aaKnown RBP8.15□□□□□ -1.11
U2AF1-212ENST00000496462 C16orf89Q6UX73 402 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 TRIM46Q7Z4K8 759 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 LRGUKQ96M69 825 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 PPM1MQ96MI6 270 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 ECSITQ9BQ95 431 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 THUMPD3Q9BV44 507 aaKnown RBP8.15□□□□□ -1.11
U2AF1-212ENST00000496462 FAM60AQ9NP50 221 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 DAPP1Q9UN19 280 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 ST14Q9Y5Y6 855 aa8.15□□□□□ -1.11
U2AF1-212ENST00000496462 PRAMEF2O60811 474 aa8.14□□□□□ -1.11
U2AF1-212ENST00000496462 CDC123O75794 336 aaPredicted RBP8.14□□□□□ -1.11
U2AF1-212ENST00000496462 GMPRP36959 345 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms