RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 HK2P52789 917 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 ALDH18A1P54886 795 aaKnown RBP13.26□□□□□ -0.29
VTI1A-209ENST00000496445 GPR85P60893 370 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 IGLV3-21P80748 117 aaPredicted RBP13.26□□□□□ -0.29
VTI1A-209ENST00000496445 ART3Q13508 389 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 CDSNQ15517 529 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 WHAMMP3Q1A5X7 153 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 AP5B1Q2VPB7 878 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 TECRLQ5HYJ1 363 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 DEPDC1Q5TB30 811 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 MTFR2Q6P444 385 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 RPTNQ6XPR3 784 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 CHSY3Q70JA7 882 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 GOLGA7Q7Z5G4 137 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 PLD6Q8N2A8 252 aaKnown RBP13.26□□□□□ -0.29
VTI1A-209ENST00000496445 MMGT1Q8N4V1 131 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 POGLUT1Q8NBL1 392 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 MORN4Q8NDC4 146 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 SLC2A12Q8TD20 617 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 ISL2Q96A47 359 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 MARVELD3Q96A59 401 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 CMTM7Q96FZ5 175 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 RASL10BQ96S79 203 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 MTERF1Q99551 399 aaKnown RBP13.26□□□□□ -0.29
VTI1A-209ENST00000496445 OR8D2Q9GZM6 311 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 DEPPQ9NTK1 212 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 ZNF358Q9NW07 568 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 MYOTQ9UBF9 498 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 YARS2Q9Y2Z4 477 aaKnown RBP13.26□□□□□ -0.29
VTI1A-209ENST00000496445 TSC22D4Q9Y3Q8 395 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 KLF2Q9Y5W3 355 aaPredicted RBP13.26□□□□□ -0.29
VTI1A-209ENST00000496445 CLCA3PQ9Y6N3 262 aa13.26□□□□□ -0.29
VTI1A-209ENST00000496445 A0A0G2JMM0 328 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 A0A1W2PPB8 328 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 A0A1W2PRS3 328 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 PINLYPA6NC86 204 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 KIR3DP1A8MWS1 328 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 H0YIV9 168 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 WWP2O00308 870 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 PEX1O43933 1283 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 ZNF354AO60765 605 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-209ENST00000496445 PRKRAO75569 313 aaKnown RBP13.25□□□□□ -0.29
VTI1A-209ENST00000496445 ETHE1O95571 254 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 ACSL3O95573 720 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 CPN2P22792 545 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 TYK2P29597 1187 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 SOX3P41225 446 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 PIK3CBP42338 1070 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 NR0B1P51843 470 aaKnown RBP13.25□□□□□ -0.29
VTI1A-209ENST00000496445 CASP6P55212 293 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 HNRNPH2P55795 449 aaKnown RBP13.25□□□□□ -0.29
VTI1A-209ENST00000496445 RPS13P62277 151 aaKnown RBP13.25□□□□□ -0.29
VTI1A-209ENST00000496445 GTF2H2Q13888 395 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 SERTAD2Q14140 314 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 PCBP2Q15366 365 aaKnown RBP eCLIP13.25□□□□□ -0.294e-7■■■■■ 37
VTI1A-209ENST00000496445 CMPK2Q5EBM0 449 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 LIPJQ5W064 366 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 SP5Q6BEB4 398 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-209ENST00000496445 OR4C11Q6IEV9 310 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 GTF2H2CQ6P1K8 395 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 HSDL2Q6YN16 418 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 BNC2Q6ZN30 1099 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-209ENST00000496445 MYLK4Q86YV6 388 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-209ENST00000496445 OR4N5Q8IXE1 308 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 ZFP62Q8NB50 900 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-209ENST00000496445 PSD4Q8NDX1 1056 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 C16orf52Q8NHV5 167 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 SLC44A1Q8WWI5 657 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 DAZLQ92904 295 aaKnown RBP13.25□□□□□ -0.29
VTI1A-209ENST00000496445 ACTR8Q9H981 624 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 CPSF2Q9P2I0 782 aaKnown RBP13.25□□□□□ -0.29
VTI1A-209ENST00000496445 ADGRE2Q9UHX3 823 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 MEMO1Q9Y316 297 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 SPACA6W5XKT8 324 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 ZNF407Q9C0G0 2248 aa13.25□□□□□ -0.29
VTI1A-209ENST00000496445 A8MVJ9 347 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 KLRC4-KLRK1H3BQV0 150 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 ADAM10O14672 748 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 TFECO14948 347 aaPredicted RBP13.24□□□□□ -0.29
VTI1A-209ENST00000496445 HNRNPRO43390 633 aaKnown RBP13.24□□□□□ -0.29
VTI1A-209ENST00000496445 HS6ST1O60243 411 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 UGDHO60701 494 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 ABOP16442 354 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 STT3AP46977 705 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 RNF4P78317 190 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 TNFRSF17Q02223 184 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 SLAMF1Q13291 335 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 C18orf63Q68DL7 685 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 KLC3Q6P597 504 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 DGAT2L6Q6ZPD8 337 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 GPALPP1Q8IXQ4 340 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 ZCCHC7Q8N3Z6 543 aaKnown RBP13.24□□□□□ -0.29
VTI1A-209ENST00000496445 L3MBTL4Q8NA19 623 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 OR8K3Q8NH51 312 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 WDR20Q8TBZ3 569 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 ZNF721Q8TF20 911 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 AGAP11Q8TF27 550 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 ASB15Q8WXK1 588 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 RGMAQ96B86 450 aa13.24□□□□□ -0.29
VTI1A-209ENST00000496445 PAFAH2Q99487 392 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms