RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TEX10Q9NXF1 929 aaPredicted RBP4.64□□□□□ -1.67
SSR3-208ENST00000496050 ERVK-18Q9QC07 812 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 SPASTQ9UBP0 616 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 COPS7AQ9UBW8 275 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 CACNG5Q9UF02 275 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 NARFQ9UHQ1 456 aa4.64□□□□□ -1.67
SSR3-208ENST00000496050 MTF2Q9Y483 593 aaPredicted RBP4.64□□□□□ -1.67
SSR3-208ENST00000496050 MPTX1A8MV57 137 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 RASGRF2O14827 1237 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 LINC01565O15544 149 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 B4GAT1O43505 415 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 TLX2O43763 284 aaPredicted RBP4.63□□□□□ -1.67
SSR3-208ENST00000496050 EDIL3O43854 480 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 ZNF821O75541 412 aaPredicted RBP4.63□□□□□ -1.67
SSR3-208ENST00000496050 ZFAND5O76080 213 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 ARF4P18085 180 aaPredicted RBP4.63□□□□□ -1.67
SSR3-208ENST00000496050 CCNA2P20248 432 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 GPX3P22352 226 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 GLRA1P23415 457 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 ASMTP46597 345 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 CRIP2P52943 208 aaPredicted RBP4.63□□□□□ -1.67
SSR3-208ENST00000496050 RBBP4Q09028 425 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 MSLNQ13421 630 aaPredicted RBP4.63□□□□□ -1.67
SSR3-208ENST00000496050 INAQ16352 499 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 RTL6Q6ICC9 239 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 TRIM65Q6PJ69 517 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 LCLAT1Q6UWP7 414 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 C3P1Q6ZMU1 363 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 KIF6Q6ZMV9 814 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 WDR88Q6ZMY6 472 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 RBM43Q6ZSC3 357 aaKnown RBP4.63□□□□□ -1.67
SSR3-208ENST00000496050 CDHR3Q6ZTQ4 885 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 C1orf186Q6ZWK4 172 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 ZNF614Q8N883 585 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 CNNM3Q8NE01 707 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 MRPL53Q96EL3 112 aaKnown RBP4.63□□□□□ -1.67
SSR3-208ENST00000496050 COQ7Q99807 217 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 FUNDC2Q9BWH2 189 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 PINK1Q9BXM7 581 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 KRT23Q9C075 422 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 WWP1Q9H0M0 922 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 TXLNGQ9NUQ3 528 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 BARHL2Q9NY43 387 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 TMEM181Q9P2C4 612 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 NUDCQ9Y266 331 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 MRPS18CQ9Y3D5 142 aaKnown RBP4.63□□□□□ -1.67
SSR3-208ENST00000496050 WDR81Q562E7 1941 aa4.63□□□□□ -1.67
SSR3-208ENST00000496050 RAD54L2Q9Y4B4 1467 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 IGLV7-46A0A075B6I9 117 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.62□□□□□ -1.67
SSR3-208ENST00000496050 SHISA7A6NL88 538 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 KPNA7A9QM74 516 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 C19orf81C9J6K1 198 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 OR6B1O95007 311 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 CALCAP01258 141 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 KRT5P13647 590 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 AOC1P19801 751 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 PKLRP30613 574 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 TNFRSF4P43489 277 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 ACADSBP45954 432 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 CLK1P49759 484 aaKnown RBP4.62□□□□□ -1.67
SSR3-208ENST00000496050 TMEM50BP56557 158 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 ZNF177Q13360 481 aaPredicted RBP4.62□□□□□ -1.67
SSR3-208ENST00000496050 WSCD2Q2TBF2 565 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 DDI2Q5TDH0 399 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 OLFM4Q6UX06 510 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 GET4Q7L5D6 327 aaPredicted RBP4.62□□□□□ -1.67
SSR3-208ENST00000496050 TBC1D10CQ8IV04 446 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 ATP8B4Q8TF62 1192 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 CNRIP1Q96F85 164 aaPredicted RBP4.62□□□□□ -1.67
SSR3-208ENST00000496050 PCED1BQ96HM7 432 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 ART5Q96L15 291 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 ALKBH3Q96Q83 286 aaPredicted RBP4.62□□□□□ -1.67
SSR3-208ENST00000496050 FTHL17Q9BXU8 183 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 NACA2Q9H009 215 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 SCRT2Q9NQ03 307 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 HPS4Q9NQG7 708 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 ZDHHC18Q9NUE0 388 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 RNF215Q9Y6U7 377 aa4.62□□□□□ -1.67
SSR3-208ENST00000496050 A0A087WYN8 130 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 ANHXE9PGG2 379 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 K7EQD1 137 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 TRAFD1O14545 582 aaPredicted RBP4.61□□□□□ -1.67
SSR3-208ENST00000496050 TFECO14948 347 aaPredicted RBP4.61□□□□□ -1.67
SSR3-208ENST00000496050 CSO75390 466 aaKnown RBP4.61□□□□□ -1.67
SSR3-208ENST00000496050 CXCL10P02778 98 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 PMP22Q01453 160 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 RIGQ13278 110 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 EPC2Q52LR7 807 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 GPAT3Q53EU6 434 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 TAF1BQ53T94 588 aaPredicted RBP4.61□□□□□ -1.67
SSR3-208ENST00000496050 CMPK2Q5EBM0 449 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 OR4N5Q8IXE1 308 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 OR52B6Q8NGF0 335 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 OR6F1Q8NGZ6 308 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 LIPHQ8WWY8 451 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 TAF4BQ92750 862 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 AGAP4Q96P64 663 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 RAB40CQ96S21 281 aa4.61□□□□□ -1.67
SSR3-208ENST00000496050 KCNK16Q96T55 309 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms