RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 KIAA1328Q86T90 577 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 GRAMD2AQ8IUY3 354 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 SCUBE1Q8IWY4 988 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 NEUROG1Q92886 237 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 SPACA9Q96E40 222 aaPredicted RBP13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 PANX2Q96RD6 677 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 FERMT1Q9BQL6 677 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 NTMT1Q9BV86 223 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 OR8D2Q9GZM6 311 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 C10orf88Q9H8K7 445 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 EIF2B3Q9NR50 452 aaKnown RBP13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 CNIH4Q9P003 139 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 PCDHGB1Q9Y5G3 927 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 CLDN16Q9Y5I7 305 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 CHCHD2Q9Y6H1 151 aaPredicted RBP13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 TENM3Q9P273 2699 aa13.16□□□□□ -0.3
CHMP2B-205ENST00000494980 CLOCKO15516 846 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 TRIM3O75382 744 aaPredicted RBP13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 GOT2P00505 430 aaKnown RBP13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 SKILP12757 684 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 SLC6A12P48065 614 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 PRPSAP1Q14558 356 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 ELAVL1Q15717 326 aaKnown RBP13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 AWAT1Q58HT5 328 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 CCDC50Q8IVM0 306 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 TMEM132CQ8N3T6 1108 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 ZNF525Q8N782 197 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 TC2NQ8N9U0 490 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 HAUS1Q96CS2 278 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 REPS1Q96D71 796 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 PANX3Q96QZ0 392 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 UCN2Q96RP3 112 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 G6PC3Q9BUM1 346 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 FAM129AQ9BZQ8 928 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 ALG2Q9H553 416 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 FAM114A2Q9NRY5 505 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 PIH1D1Q9NWS0 290 aaKnown RBP13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 CNOT11Q9UKZ1 510 aaKnown RBP13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 RNF115Q9Y4L5 304 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 CLCA3PQ9Y6N3 262 aa13.15□□□□□ -0.3
CHMP2B-205ENST00000494980 MROH6A6NGR9 719 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 FTCDO95954 541 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 SERPIND1P05546 499 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 CPN1P15169 458 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 TBXA2RP21731 343 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 HRH2P25021 359 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 PSMA3P25788 255 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 SIRPAP78324 504 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 PGGHGQ32M88 737 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 NIPAL1Q6NVV3 410 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 AFTPHQ6ULP2 937 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 SEZ6L2Q6UXD5 910 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 LRRC56Q8IYG6 542 aaPredicted RBP13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 MFSD9Q8NBP5 474 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 OR5L2Q8NGL0 311 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 OR8K3Q8NH51 312 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 KAT2AQ92830 837 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 TRAF4Q9BUZ4 470 aaPredicted RBP13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 HSD3B7Q9H2F3 369 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 ZNF148Q9UQR1 794 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 C15orf41Q9Y2V0 281 aa13.14□□□□□ -0.31
CHMP2B-205ENST00000494980 A0A0A6YYJ9 748 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 SMTNL1A8MU46 457 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 SLCO1B7G3V0H7 640 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 PRMT5O14744 637 aaPredicted RBP13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 NRDCO43847 1150 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 CST8O60676 142 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 PSIP1O75475 530 aaKnown RBP13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 TGM6O95932 706 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 MBD3O95983 291 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 ACTL6AO96019 429 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 CD8AP01732 235 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 IFNA16P05015 189 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 PTPN6P29350 595 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 RPL21P46778 160 aaKnown RBP13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 SLC13A2Q13183 592 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 MPEG1Q2M385 716 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 PIGGQ5H8A4 983 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 SCIMPQ6UWF3 145 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 SHISA2Q6UWI4 295 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 MFSD7Q6UXD7 560 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 YRDCQ86U90 279 aaKnown RBP13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 CA13Q8N1Q1 262 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 OR13J1Q8NGT2 312 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 FAM168AQ92567 244 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 P3H4Q92791 437 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 C11orf24Q96F05 449 aaPredicted RBP13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 GNRHR2Q96P88 292 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 BPIFA3Q9BQP9 254 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 PRTFDC1Q9NRG1 225 aa13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 BZW2Q9Y6E2 419 aaKnown RBP13.13□□□□□ -0.31
CHMP2B-205ENST00000494980 SYF2O95926 243 aaKnown RBP13.12□□□□□ -0.31
CHMP2B-205ENST00000494980 CATP04040 527 aaKnown RBP13.12□□□□□ -0.31
CHMP2B-205ENST00000494980 CRHP06850 196 aa13.12□□□□□ -0.31
CHMP2B-205ENST00000494980 PPP3CBP16298 524 aa13.12□□□□□ -0.31
CHMP2B-205ENST00000494980 CHMP24386 653 aa13.12□□□□□ -0.31
CHMP2B-205ENST00000494980 RBL1P28749 1068 aa13.12□□□□□ -0.31
CHMP2B-205ENST00000494980 HNRNPFP52597 415 aaKnown RBP13.12□□□□□ -0.31
CHMP2B-205ENST00000494980 RAB8AP61006 207 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms