RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 RDH11Q8TC12 318 aa13.42□□□□□ -0.26
SCAP-213ENST00000494938 METTL6Q8TCB7 284 aa13.42□□□□□ -0.26
SCAP-213ENST00000494938 SELENOMQ8WWX9 145 aa13.42□□□□□ -0.26
SCAP-213ENST00000494938 TANKQ92844 425 aa13.42□□□□□ -0.26
SCAP-213ENST00000494938 CCDC126Q96EE4 140 aa13.42□□□□□ -0.26
SCAP-213ENST00000494938 CNDP1Q96KN2 507 aa13.42□□□□□ -0.26
SCAP-213ENST00000494938 MRPL1Q9BYD6 325 aaKnown RBP13.42□□□□□ -0.26
SCAP-213ENST00000494938 RNF32Q9H0A6 362 aa13.42□□□□□ -0.26
SCAP-213ENST00000494938 CDCP1Q9H5V8 836 aa13.42□□□□□ -0.26
SCAP-213ENST00000494938 RPF2Q9H7B2 306 aaKnown RBP13.42□□□□□ -0.26
SCAP-213ENST00000494938 BRF2Q9HAW0 419 aa13.42□□□□□ -0.26
SCAP-213ENST00000494938 MKS1Q9NXB0 559 aa13.42□□□□□ -0.26
SCAP-213ENST00000494938 TEKT2Q9UIF3 430 aa13.42□□□□□ -0.26
SCAP-213ENST00000494938 PHF11Q9UIL8 331 aa13.42□□□□□ -0.26
SCAP-213ENST00000494938 ZNF223Q9UK11 482 aaPredicted RBP13.42□□□□□ -0.26
SCAP-213ENST00000494938 NTNG1Q9Y2I2 539 aa13.42□□□□□ -0.26
SCAP-213ENST00000494938 DYTNA2CJ06 578 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 BLACEA4D250 179 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 PGRMC2O15173 223 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 FGF17O60258 216 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 ESRRBO95718 433 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 TUBBP07437 444 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 CHN1P15882 459 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 TPP2P29144 1249 aaPredicted RBP13.41□□□□□ -0.26
SCAP-213ENST00000494938 CD96P40200 585 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 PKNOX1P55347 436 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 IGLV3-21P80748 117 aaPredicted RBP13.41□□□□□ -0.26
SCAP-213ENST00000494938 TNFRSF17Q02223 184 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 GALNT1Q10472 559 aaPredicted RBP13.41□□□□□ -0.26
SCAP-213ENST00000494938 STX4Q12846 297 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 SERTAD2Q14140 314 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 ELAVL1Q15717 326 aaKnown RBP13.41□□□□□ -0.26
SCAP-213ENST00000494938 MEP1AQ16819 746 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 CYP20A1Q6UW02 462 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 RPS19BP1Q86WX3 136 aaKnown RBP13.41□□□□□ -0.26
SCAP-213ENST00000494938 C10orf107Q8IVU9 208 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 BEST3Q8N1M1 668 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 ARMC10Q8N2F6 343 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 TMEM132CQ8N3T6 1108 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 EFCAB3Q8N7B9 438 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 B3GNT7Q8NFL0 401 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 AGAP11Q8TF27 550 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 HBEGFQ99075 208 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 SLC29A3Q9BZD2 475 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 TNFRSF12AQ9NP84 129 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 ADAP2Q9NPF8 381 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 ASF1BQ9NVP2 202 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 LYARQ9NX58 379 aaKnown RBP13.41□□□□□ -0.26
SCAP-213ENST00000494938 AHSPQ9NZD4 102 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 ADAM29Q9UKF5 820 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 SLC12A4Q9UP95 1085 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 TIMM22Q9Y584 194 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 COPG1Q9Y678 874 aaKnown RBP13.41□□□□□ -0.26
SCAP-213ENST00000494938 SPACA6W5XKT8 324 aa13.41□□□□□ -0.26
SCAP-213ENST00000494938 OR5H15A6NDH6 313 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 TMEM200CA6NKL6 621 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 ULK1O75385 1050 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 DDAH2O95865 285 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 KRT6AP02538 564 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 KRT6BP04259 564 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 IFNA16P05015 189 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 TLX1P31314 330 aaPredicted RBP13.4□□□□□ -0.26
SCAP-213ENST00000494938 KRT6CP48668 564 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 HTR6P50406 440 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 FOXA1P55317 472 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 MLF1P58340 268 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 ZNF844Q08AG5 666 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 TUBA3CQ13748 450 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 ZNF468Q5VIY5 522 aaPredicted RBP13.4□□□□□ -0.26
SCAP-213ENST00000494938 RPUSD3Q6P087 351 aaKnown RBP13.4□□□□□ -0.26
SCAP-213ENST00000494938 TUBA3EQ6PEY2 450 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 DGAT2L6Q6ZPD8 337 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 FRMD7Q6ZUT3 714 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 COMMD6Q7Z4G1 85 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 NUDT13Q86X67 352 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 SRRM1Q8IYB3 904 aaKnown RBP13.4□□□□□ -0.26
SCAP-213ENST00000494938 SLC5A8Q8N695 610 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 ZNF321PQ8N8H1 164 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 CHTF18Q8WVB6 975 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 NCLNQ969V3 563 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 PPWD1Q96BP3 646 aaKnown RBP13.4□□□□□ -0.26
SCAP-213ENST00000494938 KCNA7Q96RP8 456 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 VPS29Q9UBQ0 182 aa13.4□□□□□ -0.26
SCAP-213ENST00000494938 NBASA2RRP1 2371 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 TRAV17A0A0B4J275 112 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 SERTM1A2A2V5 107 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 SYNDIG1LA6NDD5 238 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 GLOD5A6NK44 160 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 PRKNO60260 465 aaPredicted RBP13.39□□□□□ -0.27
SCAP-213ENST00000494938 SPAG7O75391 227 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 GPR75O95800 540 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 AIFM1O95831 613 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 ENO1P06733 434 aaKnown RBP13.39□□□□□ -0.27
SCAP-213ENST00000494938 UQCRHP07919 91 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 HSD3B1P14060 373 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 HSD3B2P26439 372 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 CLCN2P51788 898 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 TAS2R50P59544 299 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 NAA20P61599 178 aa13.39□□□□□ -0.27
SCAP-213ENST00000494938 FOLH1Q04609 750 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms