RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 MAGEB10Q96LZ2 347 aaPredicted RBP16.05■□□□□ 0.16
SNX17-209ENST00000494893 C7orf26Q96N11 449 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 MRPL1Q9BYD6 325 aaKnown RBP16.05■□□□□ 0.16
SNX17-209ENST00000494893 SLC29A3Q9BZD2 475 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 EPN3Q9H201 632 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 ELOVL6Q9H5J4 265 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 ZNF395Q9H8N7 513 aaPredicted RBP16.05■□□□□ 0.16
SNX17-209ENST00000494893 PRM3Q9NNZ6 103 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 SLCO1B3Q9NPD5 702 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 PRTFDC1Q9NRG1 225 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 FBXW2Q9UKT8 454 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 ZNF451Q9Y4E5 1061 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 ATG4BQ9Y4P1 393 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 ASB4Q9Y574 426 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 TIMM22Q9Y584 194 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 CSAG2Q9Y5P2 127 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 SPTA1P02549 2419 aa16.05■□□□□ 0.16
SNX17-209ENST00000494893 MYOCOSA0A1B0GUC4 107 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 EDF1O60869 148 aaKnown RBP16.04■□□□□ 0.16
SNX17-209ENST00000494893 PRKRAO75569 313 aaKnown RBP16.04■□□□□ 0.16
SNX17-209ENST00000494893 SNUPNO95149 360 aaKnown RBP16.04■□□□□ 0.16
SNX17-209ENST00000494893 GBAP04062 536 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 ARRB2P32121 409 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 HSD17B7P56937 341 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 GALNT1Q10472 559 aaPredicted RBP16.04■□□□□ 0.16
SNX17-209ENST00000494893 TBL3Q12788 808 aaKnown RBP16.04■□□□□ 0.16
SNX17-209ENST00000494893 C10orf62Q5T681 223 aaPredicted RBP16.04■□□□□ 0.16
SNX17-209ENST00000494893 IGFL2Q6UWQ7 119 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 ATG14Q6ZNE5 492 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 FAM47EQ6ZV65 393 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 CLNKQ7Z7G1 428 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 METTL4Q8N3J2 472 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 NFAM1Q8NET5 270 aaPredicted RBP16.04■□□□□ 0.16
SNX17-209ENST00000494893 METTL6Q8TCB7 284 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 UCN3Q969E3 161 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 SORT1Q99523 831 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 TRMOQ9BU70 441 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 C20orf27Q9GZN8 174 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 C5AR2Q9P296 337 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 SNX6Q9UNH7 406 aa16.04■□□□□ 0.16
SNX17-209ENST00000494893 A0A1W2PR48 441 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 WASHC1A8K0Z3 465 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 A8MUA0 341 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 CTNSO60931 367 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 LYPLA1O75608 230 aaPredicted RBP16.03■□□□□ 0.16
SNX17-209ENST00000494893 HSPA4LO95757 839 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 ENO1P06733 434 aaKnown RBP16.03■□□□□ 0.16
SNX17-209ENST00000494893 DRD4P21917 467 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 TPP2P29144 1249 aaPredicted RBP16.03■□□□□ 0.16
SNX17-209ENST00000494893 SLC26A5P58743 744 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 KLRB1Q12918 225 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 BTBD16Q32M84 506 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 ARL13AQ5H913 290 aaPredicted RBP16.03■□□□□ 0.16
SNX17-209ENST00000494893 B3GNTL1Q67FW5 361 aaPredicted RBP16.03■□□□□ 0.16
SNX17-209ENST00000494893 C18orf63Q68DL7 685 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 IGFL3Q6UXB1 125 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 RIPOR1Q6ZS17 1223 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 GPR180Q86V85 440 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 SIRT6Q8N6T7 355 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 ANKRD9Q96BM1 317 aaPredicted RBP16.03■□□□□ 0.16
SNX17-209ENST00000494893 LPAR4Q99677 370 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 NPAS2Q99743 824 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 CENPKQ9BS16 269 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 MFRPQ9BY79 579 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 SHCBP1LQ9BZQ2 653 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 BRF2Q9HAW0 419 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 MID1IP1Q9NPA3 183 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 FGFR1OP2Q9NVK5 253 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 SLC12A4Q9UP95 1085 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 STK38LQ9Y2H1 464 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 DOCK10Q96BY6 2186 aa16.03■□□□□ 0.16
SNX17-209ENST00000494893 SCN2AQ99250 2005 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 PROM1O43490 865 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 FGF17O60258 216 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 LDB3O75112 727 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 KRT6AP02538 564 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 KRT6BP04259 564 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 FAM58BPP0C7Q3 252 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 CPN2P22792 545 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 KRT6CP48668 564 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 TNFRSF17Q02223 184 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 ID2Q02363 134 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 ACTN3Q08043 901 aaPredicted RBP16.02■□□□□ 0.16
SNX17-209ENST00000494893 SLC13A2Q13183 592 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 AGAP7PQ5VUJ5 663 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 SCIMPQ6UWF3 145 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 COMMD6Q7Z4G1 85 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 NUDT13Q86X67 352 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 CRLF3Q8IUI8 442 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 KIF2BQ8N4N8 673 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 EFCAB3Q8N7B9 438 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 Q8NA96 180 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 M1APQ8TC57 530 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 AGAP4Q96P64 663 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 ACPTQ9BZG2 426 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 EML4Q9HC35 981 aaKnown RBP16.02■□□□□ 0.16
SNX17-209ENST00000494893 TEX10Q9NXF1 929 aaPredicted RBP16.02■□□□□ 0.16
SNX17-209ENST00000494893 PTGFRNQ9P2B2 879 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 HAO1Q9UJM8 370 aa16.02■□□□□ 0.16
SNX17-209ENST00000494893 MRPS33Q9Y291 106 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms