RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 NR2F6P10588 404 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 TLX1P31314 330 aaPredicted RBP16.2■□□□□ 0.18
LIME1-208ENST00000493265 DLSTP36957 453 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 BUD31P41223 144 aaPredicted RBP16.2■□□□□ 0.18
LIME1-208ENST00000493265 HNRNPFP52597 415 aaKnown RBP16.2■□□□□ 0.18
LIME1-208ENST00000493265 MC1RQ01726 317 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 TNFRSF17Q02223 184 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 MAP7Q14244 749 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 PTGR1Q14914 329 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 RPS6KA2Q15349 733 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 NDUFAF5Q5TEU4 345 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 CLNKQ7Z7G1 428 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 ZNF605Q86T29 641 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 ZC3H7AQ8IWR0 971 aaKnown RBP16.2■□□□□ 0.18
LIME1-208ENST00000493265 TMEM132CQ8N3T6 1108 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 ENDOVQ8N8Q3 282 aaKnown RBP16.2■□□□□ 0.18
LIME1-208ENST00000493265 LSM14AQ8ND56 463 aaKnown RBP16.2■□□□□ 0.18
LIME1-208ENST00000493265 TMEM52Q8NDY8 209 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 STT3BQ8TCJ2 826 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 C10orf82Q8WW14 230 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 NKD1Q969G9 470 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 MIEF2Q96C03 454 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 FCRL1Q96LA6 429 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 CCT8L2Q96SF2 557 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 CLK4Q9HAZ1 481 aaKnown RBP16.2■□□□□ 0.18
LIME1-208ENST00000493265 FER1L5A0AVI2 2057 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 LOC101059948A0A1B0GTJ6 334 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 MYOCOSA0A1B0GUC4 107 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 BMP10O95393 424 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 ZGLP1P0C6A0 271 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 LIPCP11150 499 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 PRPS2P11908 318 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 STAT5AP42229 794 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 PCBP4P57723 403 aaKnown RBP16.19■□□□□ 0.18
LIME1-208ENST00000493265 RPS18P62269 152 aaKnown RBP16.19■□□□□ 0.18
LIME1-208ENST00000493265 TRA2BP62995 288 aaKnown RBP16.19■□□□□ 0.18
LIME1-208ENST00000493265 NCF4Q15080 339 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 NKG7Q16617 165 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 SMU1Q2TAY7 513 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 FAAH2Q6GMR7 532 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 OGFOD2Q6N063 350 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 PCSK4Q6UW60 755 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 VASH2Q86V25 355 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 LAPTM4BQ86VI4 370 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 ZNF248Q8NDW4 579 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 FKBP10Q96AY3 582 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 FAIM2Q9BWQ8 316 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 WDR41Q9HAD4 459 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 CPNE5Q9HCH3 593 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 MYNNQ9NPC7 610 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 AIG1Q9NVV5 245 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 MS4A12Q9NXJ0 267 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 C5AR2Q9P296 337 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 HEY2Q9UBP5 337 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 MKL2Q9ULH7 1088 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 MRPS33Q9Y291 106 aaKnown RBP16.19■□□□□ 0.18
LIME1-208ENST00000493265 PTRH2Q9Y3E5 179 aaKnown RBP16.19■□□□□ 0.18
LIME1-208ENST00000493265 ATMQ13315 3056 aa16.19■□□□□ 0.18
LIME1-208ENST00000493265 TENM4Q6N022 2769 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.18■□□□□ 0.18
LIME1-208ENST00000493265 CYR61O00622 381 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 PGRMC2O15173 223 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 SNX3O60493 162 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 ONECUT2O95948 504 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 RPS15P62841 145 aaKnown RBP16.18■□□□□ 0.18
LIME1-208ENST00000493265 BTG2P78543 158 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 ID2Q02363 134 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 KLC1Q07866 573 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 SLC13A2Q13183 592 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 DNASE1L3Q13609 305 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 ANKRD26P1Q6NSI1 321 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 MRPL14Q6P1L8 145 aaKnown RBP16.18■□□□□ 0.18
LIME1-208ENST00000493265 ZNF517Q6ZMY9 492 aaPredicted RBP16.18■□□□□ 0.18
LIME1-208ENST00000493265 OR4N5Q8IXE1 308 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 KRTCAP2Q8N6L1 136 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 ADAMTS18Q8TE60 1221 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 NUDT8Q8WV74 236 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 RPF2Q9H7B2 306 aaKnown RBP16.18■□□□□ 0.18
LIME1-208ENST00000493265 PRTFDC1Q9NRG1 225 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 ASIC5Q9NY37 505 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 ACSL6Q9UKU0 697 aa16.18■□□□□ 0.18
LIME1-208ENST00000493265 C9JVG2 144 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 LDB3O75112 727 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 ALBP02768 609 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 HEXBP07686 556 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 IDO1P14902 403 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 MAOAP21397 527 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 JAK1P23458 1154 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 F8A1P23610 371 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 ASMTP46597 345 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 STX1BP61266 288 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 HEPACAMQ14CZ8 416 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 BROXQ5VW32 411 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 FAM71E1Q6IPT2 247 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 FAM180BQ6P0A1 224 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 DTX1Q86Y01 620 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 PARP9Q8IXQ6 854 aa16.17■□□□□ 0.18
LIME1-208ENST00000493265 KIAA1143Q96AT1 154 aaPredicted RBP16.17■□□□□ 0.18
LIME1-208ENST00000493265 EXOSC8Q96B26 276 aaKnown RBP16.17■□□□□ 0.18
LIME1-208ENST00000493265 OR1F2PQ96R84 312 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms