RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.88	□□□□□ -1.63
SEC13-219	ENST00000492602	PRR14	Q9BWN1	585 aa		4.88	□□□□□ -1.63
SEC13-219	ENST00000492602	UGT2B28	Q9BY64	529 aa		4.88	□□□□□ -1.63
SEC13-219	ENST00000492602	HOMER3	Q9NSC5	361 aa		4.88	□□□□□ -1.63
SEC13-219	ENST00000492602	ABHD10	Q9NUJ1	306 aa		4.88	□□□□□ -1.63
SEC13-219	ENST00000492602	ANAPC5	Q9UJX4	755 aa		4.88	□□□□□ -1.63
SEC13-219	ENST00000492602	PCDHB10	Q9UN67	800 aa		4.88	□□□□□ -1.63
SEC13-219	ENST00000492602	EFR3B	Q9Y2G0	817 aa		4.88	□□□□□ -1.63
SEC13-219	ENST00000492602	NAALAD2	Q9Y3Q0	740 aa		4.88	□□□□□ -1.63
SEC13-219	ENST00000492602	RNF115	Q9Y4L5	304 aa		4.88	□□□□□ -1.63
SEC13-219	ENST00000492602	PTGDR2	Q9Y5Y4	395 aa		4.88	□□□□□ -1.63
SEC13-219	ENST00000492602	MRFAP1	Q9Y605	127 aa		4.88	□□□□□ -1.63
SEC13-219	ENST00000492602	RYR2	Q92736	4967 aa		4.88	□□□□□ -1.63
SEC13-219	ENST00000492602	SCN3A	Q9NY46	2000 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602		E7EVH7	732 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602		H0Y3Z8	333 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	AP3B1	O00203	1094 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	CDC7	O00311	574 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	HAT1	O14929	419 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF354A	O60765	605 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	CD8A	P01732	235 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	OR56A5	P0C7T3	313 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	PTN	P21246	168 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	TBXA2R	P21731	343 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	FMO4	P31512	558 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	STIP1	P31948	543 aa	Known RBP	4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	RPA3	P35244	121 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	BDKRB1	P46663	353 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	GPR143	P51810	404 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	HK2	P52789	917 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	RWDD2B	P57060	319 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	HILS1	P60008	231 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	OLR1	P78380	273 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	SRY	Q05066	204 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	WASHC5	Q12768	1159 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	KIF5A	Q12840	1032 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	TCEAL1	Q15170	157 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	RAB35	Q15286	201 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	TOMM20	Q15388	145 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	TAF1A	Q15573	450 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	KCTD19	Q17RG1	926 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	SLC9A4	Q6AI14	798 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF425	Q6IV72	752 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	TMEM214	Q6NUQ4	689 aa	Known RBP	4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	OPN5	Q6U736	354 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	MFSD7	Q6UXD7	560 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	QSOX2	Q6ZRP7	698 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	LINC00523	Q86TU6	105 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	CDKL3	Q8IVW4	592 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	VSTM4	Q8IW00	320 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	KATNAL2	Q8IYT4	538 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	HMGCLL1	Q8TB92	370 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	WNT2B	Q93097	391 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	ABTB1	Q969K4	478 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	MRGPRX2	Q96LB1	330 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	FCRL5	Q96RD9	977 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	C19orf43	Q9BQ61	176 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	HEMGN	Q9BXL5	484 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	CACNG6	Q9BXT2	260 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	NECTIN3	Q9NQS3	549 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	PNO1	Q9NRX1	252 aa	Known RBP	4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	AMFR	Q9UKV5	643 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	SH2B3	Q9UQQ2	575 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	NCKAP5	O14513	1909 aa		4.87	□□□□□ -1.63
SEC13-219	ENST00000492602	TRBV5-4	A0A0C4DH59	114 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	MIF4GD	A9UHW6	222 aa	Known RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	GFY	I3L273	518 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	APOC4-APOC2	K7ER74	178 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	CHST10	O43529	356 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	KIF5C	O60282	957 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	MFAP3L	O75121	409 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	LRAT	O95237	230 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	AGT	P01019	485 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	APOC2	P02655	101 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	C1QA	P02745	245 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	FES	P07332	822 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	CD3E	P07766	207 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	FREM3	P0C091	2139 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	RBP3	P10745	1247 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	PPP3CB	P16298	524 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	CCR7	P32248	378 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	CDKN2B	P42772	138 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	SLC6A12	P48065	614 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	HADHB	P55084	474 aa	Known RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	PRSS12	P56730	875 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	EIF3E	P60228	445 aa	Known RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	SIRPA	P78324	504 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	IRX1	P78414	480 aa	Predicted RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	SARNP	P82979	210 aa	Known RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	PRDX1	Q06830	199 aa	Known RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	BMPR2	Q13873	1038 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	DBN1	Q16643	649 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	EXOC3L2	Q2M3D2	409 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	PARP6	Q2NL67	630 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	ZNF672	Q499Z4	452 aa	Predicted RBP	4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	EIPR1	Q53HC9	387 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	NHSL2	Q5HYW2	709 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	MEI1	Q5TIA1	1274 aa		4.86	□□□□□ -1.63
SEC13-219	ENST00000492602	AADACL2	Q6P093	401 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms