RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 NLGN4XQ8N0W4 816 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 NLGN4YQ8NFZ3 816 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-219ENST00000491747 OR2L3Q8NG85 312 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 RHEBL1Q8TAI7 183 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 DNAJB14Q8TBM8 379 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 TMEM125Q96AQ2 219 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 PTERQ96BW5 349 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 TCTN2Q96GX1 697 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 CCNL2Q96S94 520 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-219ENST00000491747 ACAT2Q9BWD1 397 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 SLC12A9Q9BXP2 914 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 SPRTNQ9H040 489 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-219ENST00000491747 SLC6A20Q9NP91 592 aa8.94□□□□□ -0.98
BRCA1-219ENST00000491747 IFT80Q9P2H3 777 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-219ENST00000491747 MDC1Q14676 2089 aaKnown RBP8.94□□□□□ -0.98
BRCA1-219ENST00000491747 IGKV1-8A0A0C4DH67 115 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 TCRBV5S2A0A599 114 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 FUOMA2VDF0 154 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 CDC7O00311 574 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 COQ9O75208 318 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 CRCPO75575 148 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 SNAP29O95721 258 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 BCL10O95999 233 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 MSL3P1P0C860 447 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 LIFP15018 202 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 F8A1P23610 371 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 BMXP51813 675 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 EEFSECP57772 596 aaKnown RBP8.93□□□□□ -0.98
BRCA1-219ENST00000491747 RELAQ04206 551 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 LIPEQ05469 1076 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 PFKFB4Q16877 469 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 ARHGAP40Q5TG30 622 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 BROXQ5VW32 411 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 LCN10Q6JVE6 187 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 FIGLAQ6QHK4 219 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 SPATA19Q7Z5L4 167 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 OR13F1Q8NGS4 319 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 RAB2BQ8WUD1 216 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 TRUB1Q8WWH5 349 aaKnown RBP8.93□□□□□ -0.98
BRCA1-219ENST00000491747 SLC22A18Q96BI1 424 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 PDLIM5Q96HC4 596 aaKnown RBP8.93□□□□□ -0.98
BRCA1-219ENST00000491747 MAGED4Q96JG8 741 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 FCRL4Q96PJ5 515 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 ING2Q9H160 280 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 SYNPO2LQ9H987 977 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 PARVBQ9HBI1 364 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 POPDC3Q9HBV1 291 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 PFDN4Q9NQP4 134 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 STOX2Q9P2F5 926 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-219ENST00000491747 ZNF639Q9UID6 485 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 PTGDR2Q9Y5Y4 395 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 AHCTF1Q8WYP5 2266 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 CCDC88CQ9P219 2028 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 MGAQ8IWI9 3026 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 C9JVG2 144 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 UBXN8O00124 270 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 SLC16A5O15375 505 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 CTSVO60911 334 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 SCRG1O75711 98 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 SIX3O95343 332 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-219ENST00000491747 C8GP07360 202 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 LINC00032P0C843 101 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 ZNF182P17025 639 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-219ENST00000491747 JUNBP17275 347 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-219ENST00000491747 FOXA1P55317 472 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 TMPRSS3P57727 454 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 ADARB1P78563 741 aaKnown RBP8.93□□□□□ -0.98
BRCA1-219ENST00000491747 LCP2Q13094 533 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 TSTA3Q13630 321 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-219ENST00000491747 ARHGAP19Q14CB8 494 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 RGS21Q2M5E4 152 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 RABL3Q5HYI8 236 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 MANEAQ5SRI9 462 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 FAM199XQ6PEV8 388 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-219ENST00000491747 SBSNQ6UWP8 590 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 C6orf15Q6UXA7 325 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-219ENST00000491747 CCDC81Q6ZN84 652 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 BPHLQ86WA6 291 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-219ENST00000491747 CENPSQ8N2Z9 138 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 RAB42Q8N4Z0 105 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 IL22RA1Q8N6P7 574 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 CHPT1Q8WUD6 406 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 SMPDL3AQ92484 453 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 CHRNA10Q9GZZ6 450 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 GIMAP2Q9UG22 337 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 TAC3Q9UHF0 121 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 LEF1Q9UJU2 399 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-219ENST00000491747 BLOC1S6Q9UL45 172 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 LHX6Q9UPM6 363 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 SH2B3Q9UQQ2 575 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 GPR45Q9Y5Y3 372 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 CACNA1BQ00975 2339 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 PTPRQQ9UMZ3 2332 aa8.93□□□□□ -0.98
BRCA1-219ENST00000491747 NPEPPSL1A6NEC2 478 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 CCDC154A6NI56 674 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 K7ENP7 123 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 TERTO14746 1132 aaKnown RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 EEDO75530 441 aaKnown RBP8.92□□□□□ -0.98
BRCA1-219ENST00000491747 CHEK2O96017 543 aa8.92□□□□□ -0.98
BRCA1-219ENST00000491747 NPPAP01160 153 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms