RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 KCNJ10P78508 379 aa9.4□□□□□ -0.91
ERCC3-208ENST00000491292 P2RY14Q15391 338 aa9.4□□□□□ -0.91
ERCC3-208ENST00000491292 FCN2Q15485 313 aa9.4□□□□□ -0.91
ERCC3-208ENST00000491292 SSX1Q16384 188 aa9.4□□□□□ -0.91
ERCC3-208ENST00000491292 IQCHQ86VS3 1027 aa9.4□□□□□ -0.91
ERCC3-208ENST00000491292 NXPE1Q8N323 547 aa9.4□□□□□ -0.91
ERCC3-208ENST00000491292 SAMD12Q8N8I0 201 aa9.4□□□□□ -0.91
ERCC3-208ENST00000491292 REPS1Q96D71 796 aa9.4□□□□□ -0.91
ERCC3-208ENST00000491292 MCCC1Q96RQ3 725 aaPredicted RBP9.4□□□□□ -0.91
ERCC3-208ENST00000491292 P2RY13Q9BPV8 354 aa9.4□□□□□ -0.91
ERCC3-208ENST00000491292 SORBS1Q9BX66 1292 aaKnown RBP9.4□□□□□ -0.91
ERCC3-208ENST00000491292 TXNL4BQ9NX01 149 aaKnown RBP9.4□□□□□ -0.91
ERCC3-208ENST00000491292 CFAP20Q9Y6A4 193 aaKnown RBP9.4□□□□□ -0.91
ERCC3-208ENST00000491292 POM121CA8CG34 1229 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 RTCAO00442 366 aaKnown RBP9.39□□□□□ -0.91
ERCC3-208ENST00000491292 IGSF6O95976 241 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 HRGP04196 525 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 H1F0P07305 194 aaKnown RBP9.39□□□□□ -0.91
ERCC3-208ENST00000491292 DDCP20711 480 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 HMGCLP35914 325 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 CHRNEQ04844 493 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 BTN1A1Q13410 526 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 CACUL1Q86Y37 369 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 TRAPPC5Q8IUR0 188 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 KIAA1958Q8N8K9 716 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 CEP76Q8TAP6 659 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 RIPOR3Q96MK2 946 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 OPALINQ96PE5 141 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 PTPN18Q99952 460 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 BTBD2Q9BX70 525 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 HECAQ9UBI9 543 aaPredicted RBP9.39□□□□□ -0.91
ERCC3-208ENST00000491292 SLC23A1Q9UHI7 598 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 QSER1Q2KHR3 1735 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 CEP350Q5VT06 3117 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 PRR23AA6NEV1 266 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 WASH4PA8MWX3 477 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 KDM4BO94953 1096 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 SYPP08247 313 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 CCR7P32248 378 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 RNF144AP50876 292 aaPredicted RBP9.39□□□□□ -0.91
ERCC3-208ENST00000491292 DSTNP60981 165 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 ARL9Q6T311 187 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 LSRQ86X29 649 aaPredicted RBP9.39□□□□□ -0.91
ERCC3-208ENST00000491292 VRK3Q8IV63 474 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 GANCQ8TET4 914 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 PARK7Q99497 189 aaKnown RBP9.39□□□□□ -0.91
ERCC3-208ENST00000491292 NTMT1Q9BV86 223 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 C2orf49Q9BVC5 232 aaPredicted RBP9.39□□□□□ -0.91
ERCC3-208ENST00000491292 BARHL1Q9BZE3 327 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 SRRQ9GZT4 340 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 NANSQ9NR45 359 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 GULP1Q9UBP9 304 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 PCDHB8Q9UN66 801 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 POLHQ9Y253 713 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 RGPD3A6NKT7 1758 aaPredicted RBP9.39□□□□□ -0.91
ERCC3-208ENST00000491292 RGPD4Q7Z3J3 1758 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 KLK8O60259 260 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 GATMP50440 423 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 AP2S1P53680 142 aaPredicted RBP9.39□□□□□ -0.91
ERCC3-208ENST00000491292 DBPQ10586 325 aaPredicted RBP9.39□□□□□ -0.91
ERCC3-208ENST00000491292 EIF4HQ15056 248 aaKnown RBP9.39□□□□□ -0.91
ERCC3-208ENST00000491292 AFMIDQ63HM1 303 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 TRIM46Q7Z4K8 759 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 RBM45Q8IUH3 476 aaKnown RBP9.39□□□□□ -0.91
ERCC3-208ENST00000491292 IQCF2Q8IXL9 164 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 SAP130Q9H0E3 1048 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 KCNK12Q9HB15 430 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 HHATLQ9HCP6 504 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 GLTPQ9NZD2 209 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 FNIP2Q9P278 1114 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 HCSTQ9UBK5 93 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 PCDHGA2Q9Y5H1 932 aa9.39□□□□□ -0.91
ERCC3-208ENST00000491292 MBLAC1A4D2B0 266 aaPredicted RBP9.38□□□□□ -0.91
ERCC3-208ENST00000491292 PDGFAP04085 211 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 ARSBP15848 533 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 PRKACAP17612 351 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 ACRV1P26436 265 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 PPM1FP49593 454 aaPredicted RBP9.38□□□□□ -0.91
ERCC3-208ENST00000491292 STK19P49842 368 aaPredicted RBP9.38□□□□□ -0.91
ERCC3-208ENST00000491292 VSX2P58304 361 aaPredicted RBP9.38□□□□□ -0.91
ERCC3-208ENST00000491292 SLBPQ14493 270 aaKnown RBP eCLIP9.38□□□□□ -0.91
ERCC3-208ENST00000491292 SLC5A12Q1EHB4 618 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 LRIF1Q5T3J3 769 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 AGTRAPQ6RW13 159 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 CALHM3Q86XJ0 350 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 ZNF614Q8N883 585 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 GDPD1Q8N9F7 314 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 HUS1BQ8NHY5 278 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 CLSTN3Q9BQT9 956 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 SESN1Q9Y6P5 492 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 TRIP12Q14669 1992 aaPredicted RBP9.38□□□□□ -0.91
ERCC3-208ENST00000491292 M0R3H8 397 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 RFXAPO00287 272 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 CSNK1DP48730 415 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 GZMKP49863 264 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 ESCO2Q56NI9 601 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 TOR2AQ5JU69 321 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 ZNF613Q6PF04 617 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 ZNF767PQ75MW2 155 aa9.38□□□□□ -0.91
ERCC3-208ENST00000491292 HOMEZQ8IX15 550 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms