RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 COMMD8Q9NX08 183 aa3.98□□□□□ -1.77
HMGB1P38-201ENST00000490557 MMP24Q9Y5R2 645 aa3.98□□□□□ -1.77
HMGB1P38-201ENST00000490557 A0A087X0K7 114 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 ARHGEF33A8MVX0 844 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 ZNF263O14978 683 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 TTI1O43156 1089 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 SEC22BO75396 215 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 ANGPTL1O95841 491 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 GAS8O95995 478 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 CASQ1P31415 396 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 PRPHP41219 470 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 MAGEB1P43366 347 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 PGFP49763 221 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 BACE1P56817 501 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 ASIC1P78348 528 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 CBX3Q13185 183 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 GPR50Q13585 617 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 RCN2Q14257 317 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 RPS6KA1Q15418 735 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 KNOP1Q1ED39 458 aaKnown RBP3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 PLPP4Q5VZY2 271 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 KDELC1Q6UW63 502 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 SLC25A42Q86VD7 318 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 SLC47A2Q86VL8 602 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 THEM5Q8N1Q8 247 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 POM121L12Q8N7R1 296 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 ZNF540Q8NDQ6 660 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 C17orf47Q8NEP4 570 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 OR6F1Q8NGZ6 308 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 TOMM40LQ969M1 308 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 SNRNP40Q96DI7 357 aaKnown RBP3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 TNFRSF13CQ96RJ3 184 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 ATP6V0BQ99437 205 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 RBM24Q9BX46 236 aaKnown RBP3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 PUS3Q9BZE2 481 aaKnown RBP3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 OCR1Q9BZK8 76 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 C1orf21Q9H246 121 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 NMUR1Q9HB89 426 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 LIPT1Q9Y234 373 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 AP1M2Q9Y6Q5 423 aa3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 TDRD15B5MCY1 1934 aaKnown RBP3.97□□□□□ -1.77
HMGB1P38-201ENST00000490557 TRGV8A0A0C4DH27 118 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 PRPSAP2O60256 369 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 KINO60870 393 aaKnown RBP3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 NOL3O60936 208 aaKnown RBP3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 PNPP00491 289 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 CALCAP01258 141 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 RPS2P15880 293 aaKnown RBP3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 ATP4BP51164 291 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 STX1BP61266 288 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 LMO4P61968 165 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 KLHL30Q0D2K2 578 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 C17orf67Q0P5P2 114 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 COX10Q12887 443 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 MRPL28Q13084 256 aaKnown RBP3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 WSCD2Q2TBF2 565 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 FUT11Q495W5 492 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 HIGD2BQ4VC39 106 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 FAM182AQ5T1J6 154 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 SNRNP48Q6IEG0 339 aaKnown RBP3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 OLFM4Q6UX06 510 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 TBC1D10CQ8IV04 446 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 FBXO30Q8TB52 745 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 CD99L2Q8TCZ2 262 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 LIPHQ8WWY8 451 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 ZNF606Q8WXB4 792 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 TRIM44Q96DX7 344 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 ALKBH3Q96Q83 286 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 PANX3Q96QZ0 392 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 SPXQ9BT56 116 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 RPP25Q9BUL9 199 aaKnown RBP3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 TEX13BQ9BXU2 312 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 LRRCC1Q9C099 1032 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 ZNF665Q9H7R5 613 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 RNPEPL1Q9HAU8 725 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 MID1IP1Q9NPA3 183 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 PLEK2Q9NYT0 353 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 MGAT4AQ9UM21 535 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 CSAG2Q9Y5P2 127 aa3.96□□□□□ -1.78
HMGB1P38-201ENST00000490557 KIAA1217Q5T5P2 1943 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 PCNX3Q9H6A9 2034 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 CHUKO15111 745 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 SYT7O43581 403 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 SBK2P0C263 348 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 SELEP16581 610 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 PPP2R1AP30153 589 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 SERPINB6P35237 376 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 PTGER3P43115 390 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 TKTL1P51854 596 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 DSCR10P59022 87 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 LCP2Q13094 533 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 RPA4Q13156 261 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 TOR1AIP1Q5JTV8 583 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 MUC21Q5SSG8 566 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 PPP1R42Q7Z4L9 355 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 BANPQ8N9N5 519 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 C8orf46Q8TAG6 207 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 FIBINQ8TAL6 211 aa3.95□□□□□ -1.78
HMGB1P38-201ENST00000490557 GPR148Q8TDV2 347 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms