RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-208ENST00000490417 DMRT3Q9NQL9 472 aa12.71□□□□□ -0.37
SFXN4-208ENST00000490417 NECTIN3Q9NQS3 549 aa12.71□□□□□ -0.37
SFXN4-208ENST00000490417 COPS7AQ9UBW8 275 aa12.71□□□□□ -0.37
SFXN4-208ENST00000490417 FBXW2Q9UKT8 454 aa12.71□□□□□ -0.37
SFXN4-208ENST00000490417 SNX6Q9UNH7 406 aa12.71□□□□□ -0.37
SFXN4-208ENST00000490417 CSAG2Q9Y5P2 127 aa12.71□□□□□ -0.37
SFXN4-208ENST00000490417 LRRK2Q5S007 2527 aa12.71□□□□□ -0.37
SFXN4-208ENST00000490417 ESPL1Q14674 2120 aa12.71□□□□□ -0.38
SFXN4-208ENST00000490417 GABRR3A8MPY1 467 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 A8MUA0 341 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 C4orf51C9J302 202 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 CYR61O00622 381 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 SEMA3DO95025 777 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 SIX3O95343 332 aaPredicted RBP12.7□□□□□ -0.38
SFXN4-208ENST00000490417 TNFRSF8P28908 595 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 CCT5P48643 541 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 PER3P56645 1201 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 TUBA3CQ13748 450 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 OR1C1Q15619 314 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 ZRSR2Q15696 482 aaKnown RBP12.7□□□□□ -0.38
SFXN4-208ENST00000490417 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.7□□□□□ -0.38
SFXN4-208ENST00000490417 GGTA1PQ4G0N0 100 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 FRG2Q64ET8 278 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 TUBA3EQ6PEY2 450 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 GPR180Q86V85 440 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 NUDT13Q86X67 352 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 HOMEZQ8IX15 550 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 TMEM156Q8N614 296 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 MORN4Q8NDC4 146 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 ART5Q96L15 291 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 FRG2BQ96QU4 278 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 AICDAQ9GZX7 198 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 RPF2Q9H7B2 306 aaKnown RBP12.7□□□□□ -0.38
SFXN4-208ENST00000490417 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.7□□□□□ -0.38
SFXN4-208ENST00000490417 ZNF358Q9NW07 568 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 LRFN1Q9P244 771 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 VTI1BQ9UEU0 232 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 PCTPQ9UKL6 214 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 PPIEQ9UNP9 301 aaKnown RBP12.7□□□□□ -0.38
SFXN4-208ENST00000490417 SCN2AQ99250 2005 aa12.7□□□□□ -0.38
SFXN4-208ENST00000490417 ASH1LQ9NR48 2969 aaKnown RBP12.69□□□□□ -0.38
SFXN4-208ENST00000490417 TRBV11-1A0A0K0K1C0 115 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 SAP18O00422 153 aaKnown RBP12.69□□□□□ -0.38
SFXN4-208ENST00000490417 SH3BGRLO75368 114 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 TBX6O95947 436 aaPredicted RBP12.69□□□□□ -0.38
SFXN4-208ENST00000490417 F10P00742 488 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 KRT15P19012 456 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 ATP5F1P24539 256 aaPredicted RBP12.69□□□□□ -0.38
SFXN4-208ENST00000490417 UQCRFS1P47985 274 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 RPS13P62277 151 aaKnown RBP12.69□□□□□ -0.38
SFXN4-208ENST00000490417 HERVK_113P63132 956 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 PLIN5Q00G26 463 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 EIF2S3LQ2VIR3 472 aaKnown RBP12.69□□□□□ -0.38
SFXN4-208ENST00000490417 FCRLBQ6BAA4 426 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 ADNP2Q6IQ32 1131 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 HSDL2Q6YN16 418 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 CLNKQ7Z7G1 428 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 WDR20Q8TBZ3 569 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 SSC4DQ8WTU2 575 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 DGAT2Q96PD7 388 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 MAPKAP1Q9BPZ7 522 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 C1QTNF3Q9BXJ4 246 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 ERVK-6Q9BXR3 956 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 SEMA4BQ9NPR2 832 aaPredicted RBP12.69□□□□□ -0.38
SFXN4-208ENST00000490417 KCMF1Q9P0J7 381 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 SLC5A6Q9Y289 635 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 RNF11Q9Y3C5 154 aa12.69□□□□□ -0.38
SFXN4-208ENST00000490417 H3BQF6 201 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 KLRC4-KLRK1H3BQV0 150 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 RTCAO00442 366 aaKnown RBP12.68□□□□□ -0.38
SFXN4-208ENST00000490417 PLPP1O14494 284 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 SUPT7LO94864 414 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 KRT6AP02538 564 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 KRT6BP04259 564 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 RPS17P08708 135 aaKnown RBP12.68□□□□□ -0.38
SFXN4-208ENST00000490417 FAM153BP0C7A2 387 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 CD96P40200 585 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 KRT6CP48668 564 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 CASP6P55212 293 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 MLF1P58340 268 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 MRPL49Q13405 166 aaKnown RBP12.68□□□□□ -0.38
SFXN4-208ENST00000490417 RASA2Q15283 850 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 CCDC153Q494R4 210 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 FAM153CQ494X1 144 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 UBAP2Q5T6F2 1119 aaKnown RBP12.68□□□□□ -0.38
SFXN4-208ENST00000490417 C6orf163Q5TEZ5 329 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 SLC25A25Q6KCM7 469 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 UBE3DQ7Z6J8 389 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 GPALPP1Q8IXQ4 340 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 NFAM1Q8NET5 270 aaPredicted RBP12.68□□□□□ -0.38
SFXN4-208ENST00000490417 OR8K3Q8NH51 312 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 NR4A3Q92570 626 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 NCLNQ969V3 563 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 TXLNGYQ9BZA5 131 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 DDX31Q9H8H2 851 aaKnown RBP12.68□□□□□ -0.38
SFXN4-208ENST00000490417 BRF2Q9HAW0 419 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 TBK1Q9UHD2 729 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 ADAM29Q9UKF5 820 aa12.68□□□□□ -0.38
SFXN4-208ENST00000490417 YARS2Q9Y2Z4 477 aaKnown RBP12.68□□□□□ -0.38
SFXN4-208ENST00000490417 SPENQ96T58 3664 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms