RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 HNRNPH2P55795 449 aaKnown RBP18.4■□□□□ 0.54
SMC4-222ENST00000490207 CUL3Q13618 768 aa18.4■□□□□ 0.54
SMC4-222ENST00000490207 SLC29A2Q14542 456 aa18.4■□□□□ 0.54
SMC4-222ENST00000490207 GPR180Q86V85 440 aa18.4■□□□□ 0.54
SMC4-222ENST00000490207 NUDT13Q86X67 352 aa18.4■□□□□ 0.54
SMC4-222ENST00000490207 MORN4Q8NDC4 146 aa18.4■□□□□ 0.54
SMC4-222ENST00000490207 ZNF483Q8TF39 744 aaPredicted RBP18.4■□□□□ 0.54
SMC4-222ENST00000490207 ANKRD9Q96BM1 317 aaPredicted RBP18.4■□□□□ 0.54
SMC4-222ENST00000490207 EPB41L4BQ9H329 900 aa18.4■□□□□ 0.54
SMC4-222ENST00000490207 TRIM45Q9H8W5 580 aaPredicted RBP18.4■□□□□ 0.54
SMC4-222ENST00000490207 LYARQ9NX58 379 aaKnown RBP18.4■□□□□ 0.54
SMC4-222ENST00000490207 SEC14L3Q9UDX4 400 aa18.4■□□□□ 0.54
SMC4-222ENST00000490207 FETUBQ9UGM5 382 aa18.4■□□□□ 0.54
SMC4-222ENST00000490207 PPT2Q9UMR5 302 aa18.4■□□□□ 0.54
SMC4-222ENST00000490207 POLEQ07864 2286 aa18.39■□□□□ 0.54
SMC4-222ENST00000490207 UTP20O75691 2785 aaKnown RBP18.39■□□□□ 0.53
SMC4-222ENST00000490207 A0A0A6YYD5 115 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 ASPDHA6ND91 283 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 CYSRT1A8MQ03 144 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 C17orf105B2RV13 164 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 FGF17O60258 216 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 PRKNO60260 465 aaPredicted RBP18.39■□□□□ 0.53
SMC4-222ENST00000490207 NME2P1O60361 137 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 EEDO75530 441 aaKnown RBP18.39■□□□□ 0.53
SMC4-222ENST00000490207 ITGA10O75578 1167 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 ZFAND5O76080 213 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 UNC5CO95185 931 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 TNNI3P19429 210 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 NME2P22392 152 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 BSGP35613 385 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 BUD31P41223 144 aaPredicted RBP18.39■□□□□ 0.53
SMC4-222ENST00000490207 IGLV3-21P80748 117 aaPredicted RBP18.39■□□□□ 0.53
SMC4-222ENST00000490207 MAPKAPK3Q16644 382 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 GGTA1PQ4G0N0 100 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 TEX35Q5T0J7 233 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 FRG2Q64ET8 278 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 TTC19Q6DKK2 380 aaPredicted RBP18.39■□□□□ 0.53
SMC4-222ENST00000490207 CYP20A1Q6UW02 462 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 RPS27LQ71UM5 84 aaKnown RBP18.39■□□□□ 0.53
SMC4-222ENST00000490207 C7orf57Q8NEG2 295 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 OR4F6Q8NGB9 312 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 PTPMT1Q8WUK0 201 aaPredicted RBP18.39■□□□□ 0.53
SMC4-222ENST00000490207 TMEM125Q96AQ2 219 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 MTFMTQ96DP5 389 aaKnown RBP18.39■□□□□ 0.53
SMC4-222ENST00000490207 FRMD6Q96NE9 622 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 FRG2BQ96QU4 278 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 SERPINI1Q99574 410 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 OR8D2Q9GZM6 311 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 RPF2Q9H7B2 306 aaKnown RBP18.39■□□□□ 0.53
SMC4-222ENST00000490207 PSD3Q9NYI0 1048 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 PLEKHB1Q9UF11 243 aaPredicted RBP18.39■□□□□ 0.53
SMC4-222ENST00000490207 ATG4BQ9Y4P1 393 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 ICE1Q9Y2F5 2266 aa18.39■□□□□ 0.53
SMC4-222ENST00000490207 SPTBN1Q01082 2364 aaKnown RBP18.38■□□□□ 0.53
SMC4-222ENST00000490207 A1L4Q6 167 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 WIPF3A6NGB9 483 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 LRRTM2O43300 516 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 PRKRAO75569 313 aaKnown RBP18.38■□□□□ 0.53
SMC4-222ENST00000490207 SEMA3DO95025 777 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 STSP08842 583 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 TAC1P20366 129 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 TLX1P31314 330 aaPredicted RBP18.38■□□□□ 0.53
SMC4-222ENST00000490207 PER3P56645 1201 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 IFT88Q13099 833 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 C10orf62Q5T681 223 aaPredicted RBP18.38■□□□□ 0.53
SMC4-222ENST00000490207 C18orf63Q68DL7 685 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 MRM1Q6IN84 353 aaKnown RBP18.38■□□□□ 0.53
SMC4-222ENST00000490207 MILR1Q7Z6M3 343 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 LCA5Q86VQ0 697 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 ZNF227Q86WZ6 799 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 OR4N5Q8IXE1 308 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 CYP4Z2PQ8N1L4 340 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 TMEM151AQ8N4L1 468 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 TMEM156Q8N614 296 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 SLC2A12Q8TD20 617 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 DGAT2Q96PD7 388 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 C1QTNF3Q9BXJ4 246 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 DDX31Q9H8H2 851 aaKnown RBP18.38■□□□□ 0.53
SMC4-222ENST00000490207 L2HGDHQ9H9P8 463 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 TMEM216Q9P0N5 145 aa18.38■□□□□ 0.53
SMC4-222ENST00000490207 TMPRSS11DO60235 418 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 MLYCDO95822 493 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 OTCP00480 354 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 NR2F6P10588 404 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 COX7A2P14406 83 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 STT3AP46977 705 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 SSR4P51571 173 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 PLIN5Q00G26 463 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 ALDH6A1Q02252 535 aaKnown RBP18.37■□□□□ 0.53
SMC4-222ENST00000490207 FOLH1Q04609 750 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 C1QL3Q5VWW1 255 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 HSDL2Q6YN16 418 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.37■□□□□ 0.53
SMC4-222ENST00000490207 CNPY4Q8N129 248 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 ZNF321PQ8N8H1 164 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 EIF1ADQ8N9N8 165 aaKnown RBP18.37■□□□□ 0.53
SMC4-222ENST00000490207 TANKQ92844 425 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 ELOVL6Q9H5J4 265 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 COPS7AQ9UBW8 275 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 TBK1Q9UHD2 729 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms