RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 FAM71F2Q6NXP2 309 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 CASC4Q6P4E1 433 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 DCDC5Q6ZRR9 648 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 STXBP4Q6ZWJ1 553 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 PTOV1Q86YD1 416 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 GPSM1Q86YR5 675 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 EMC1Q8N766 993 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 GATSQ8NAP1 163 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 B3GALNT2Q8NCR0 500 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 CMASQ8NFW8 434 aaPredicted RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SLC2A14Q8TDB8 520 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 CCDC12Q8WUD4 166 aaPredicted RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 FAM3CQ92520 227 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 CDKN2AIPNLQ96HQ2 116 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 CTAGE1Q96RT6 745 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 MCCC2Q9HCC0 563 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 ITM2BQ9Y287 266 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SPEF2Q9C093 1822 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 ARFGEF1Q9Y6D6 1849 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 LOC105371242A0A075B767 164 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 A0A1B0GTL3 188 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 CTAGE15A4D2H0 777 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SNTNA6NMZ2 147 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 OVOL3O00110 214 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 CBR3O75828 277 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 NFATC1O95644 943 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 COL4A1P02462 1669 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SERPINB6P35237 376 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 OR1G1P47890 313 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 MTCP1P56278 107 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 TAS2R38P59533 333 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 OR1C1Q15619 314 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 KRTAP19-4Q3LI73 84 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 LIN9Q5TKA1 542 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 FOCADQ5VW36 1801 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 EFL1Q7Z2Z2 1120 aaKnown RBP2.7□□□□□ -1.98
UBXN4-208ENST00000490163 CTAGE6Q86UF2 777 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 C1orf87Q8N0U7 546 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 ANKFN1Q8N957 763 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 ARRDC2Q8TBH0 407 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 MAIP1Q8WWC4 291 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 MCHR2Q969V1 340 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SARAFQ96BY9 339 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 BBS4Q96RK4 519 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SLC30A2Q9BRI3 323 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 DPH5Q9H2P9 285 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SNX25Q9H3E2 840 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 CLSTN2Q9H4D0 955 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 MED20Q9H944 212 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 VIPAS39Q9H9C1 493 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 TCP11L1Q9NUJ3 509 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 SPHK1Q9NYA1 384 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 NPAP1Q9NZP6 1156 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 LAMP3Q9UQV4 416 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 ERVK-19Q9WJR5 959 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 WDR83OSQ9Y284 106 aa2.7□□□□□ -1.98
UBXN4-208ENST00000490163 PAPPA2Q9BXP8 1791 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 RPAP1Q9BWH6 1393 aaPredicted RBP2.69□□□□□ -1.98
UBXN4-208ENST00000490163 CDHR2Q9BYE9 1310 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 P2RX6O15547 441 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 SLC28A2O43868 658 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 SHOX2O60902 331 aaPredicted RBP2.69□□□□□ -1.98
UBXN4-208ENST00000490163 PAPSS2O95340 614 aaPredicted RBP2.69□□□□□ -1.98
UBXN4-208ENST00000490163 POP4O95707 220 aaKnown RBP2.69□□□□□ -1.98
UBXN4-208ENST00000490163 AGTP01019 485 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 CD63P08962 238 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 ZNF18P17022 549 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 EIF3EP60228 445 aaKnown RBP2.69□□□□□ -1.98
UBXN4-208ENST00000490163 ZXDAP98168 799 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 MECOMQ03112 1051 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 ILF2Q12905 390 aaKnown RBP2.69□□□□□ -1.98
UBXN4-208ENST00000490163 FOXE3Q13461 319 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 RAPSNQ13702 412 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 KRT71Q3SY84 523 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 C8orf82Q6P1X6 216 aaPredicted RBP2.69□□□□□ -1.98
UBXN4-208ENST00000490163 CLEC2AQ6UVW9 174 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 ZBTB49Q6ZSB9 765 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 BTN2A1Q7KYR7 527 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 NANOGNBQ7Z5D8 188 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 YTHDF3Q7Z739 585 aaKnown RBP2.69□□□□□ -1.98
UBXN4-208ENST00000490163 FAM131BQ86XD5 332 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 MYOCDQ8IZQ8 938 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 LZICQ8WZA0 190 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 HAS1Q92839 578 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 PEX13Q92968 403 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 AZIN2Q96A70 460 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 IGSF21Q96ID5 467 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 BTBD9Q96Q07 612 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 TRIM2Q9C040 744 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 VCX3BQ9H321 246 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 VAT1LQ9HCJ6 419 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 VCX3AQ9NNX9 186 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 ACKR4Q9NPB9 350 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 C15orf41Q9Y2V0 281 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 DDTLA6NHG4 134 aaPredicted RBP2.69□□□□□ -1.98
UBXN4-208ENST00000490163 F8VZ95 297 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 LDB2O43679 373 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 LCMT2O60294 686 aaKnown RBP2.69□□□□□ -1.98
UBXN4-208ENST00000490163 DFFBO76075 338 aa2.69□□□□□ -1.98
UBXN4-208ENST00000490163 OR2F2O95006 317 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms