RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 JSRP1Q96MG2 331 aaPredicted RBP8.38□□□□□ -1.07
SSBP1-212ENST00000489378 CXorf56Q9H5V9 222 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 CALHM2Q9HA72 323 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 CCDC177Q9NQR7 707 aaPredicted RBP8.38□□□□□ -1.07
SSBP1-212ENST00000489378 QPCTLQ9NXS2 382 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 CAPN11Q9UMQ6 739 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 SLC6A5Q9Y345 797 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 MMACHCQ9Y4U1 282 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 FREM1Q5H8C1 2179 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 PRR14LQ5THK1 2151 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 MYOCOSA0A1B0GUC4 107 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 A8MXE2 369 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 C4orf51C9J302 202 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 PJA2O43164 708 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 OR1F1O43749 312 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 GPRIN2O60269 458 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 GDF1P27539 372 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 SKIV2L2P42285 1042 aaKnown RBP8.37□□□□□ -1.07
SSBP1-212ENST00000489378 HNRNPFP52597 415 aaKnown RBP8.37□□□□□ -1.07
SSBP1-212ENST00000489378 SKP1P63208 163 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 RNF4P78317 190 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 CDH17Q12864 832 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 PWP1Q13610 501 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF791Q3KP31 576 aaPredicted RBP8.37□□□□□ -1.07
SSBP1-212ENST00000489378 C6orf52Q5T4I8 152 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 SLC22A10Q63ZE4 541 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 C8orf86Q6ZUL3 223 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 C17orf64Q86WR6 236 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 TMEM52Q8NDY8 209 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 PAQR8Q8TEZ7 354 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 ASB11Q8WXH4 323 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 ANKRD9Q96BM1 317 aaPredicted RBP8.37□□□□□ -1.07
SSBP1-212ENST00000489378 MED18Q9BUE0 208 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 SFXN3Q9BWM7 321 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 BEX2Q9BXY8 128 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 ADAP2Q9NPF8 381 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 HOMER3Q9NSC5 361 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 ZNHIT6Q9NWK9 470 aaKnown RBP8.37□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF226Q9NYT6 803 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF148Q9UQR1 794 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 TCAF1Q9Y4C2 921 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.37□□□□□ -1.07
SSBP1-212ENST00000489378 ALPK2Q86TB3 2170 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 PSMD3O43242 534 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 ACSL3O95573 720 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 CHRM3P20309 590 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 CCKARP32238 428 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 GRK3P35626 688 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 ASPHQ12797 758 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 SLC13A2Q13183 592 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 CUL1Q13616 776 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 SF3B4Q15427 424 aaKnown RBP eCLIP8.37□□□□□ -1.079e-6■■□□□ 14.4
SSBP1-212ENST00000489378 P3H1Q32P28 736 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 NIPAL1Q6NVV3 410 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 C22orf34Q6ZV56 151 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF550Q7Z398 422 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 CLNKQ7Z7G1 428 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 LINC00523Q86TU6 105 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 GCNT2Q8N0V5 402 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 MPP5Q8N3R9 675 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 PRELID2Q8N945 189 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 TC2NQ8N9U0 490 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 GIMAP7Q8NHV1 300 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 NT5CQ8TCD5 201 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 PTPMT1Q8WUK0 201 aaPredicted RBP8.37□□□□□ -1.07
SSBP1-212ENST00000489378 LPGAT1Q92604 370 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 ALKBH8Q96BT7 664 aaKnown RBP8.37□□□□□ -1.07
SSBP1-212ENST00000489378 INTS12Q96CB8 462 aaKnown RBP8.37□□□□□ -1.07
SSBP1-212ENST00000489378 ZC3HAV1LQ96H79 300 aaKnown RBP8.37□□□□□ -1.07
SSBP1-212ENST00000489378 UGT2B28Q9BY64 529 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 OR8D2Q9GZM6 311 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 RBSNQ9H1K0 784 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 KLHL31Q9H511 634 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 CHRAC1Q9NRG0 131 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 PRTFDC1Q9NRG1 225 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 PSD3Q9NYI0 1048 aa8.37□□□□□ -1.07
SSBP1-212ENST00000489378 YLPM1P49750 1951 aaKnown RBP8.36□□□□□ -1.07
SSBP1-212ENST00000489378 SERTM1A2A2V5 107 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 HMGB1P1B2RPK0 211 aaPredicted RBP8.36□□□□□ -1.07
SSBP1-212ENST00000489378 GFYI3L273 518 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 M0R082 166 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 NRDCO43847 1150 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 TRAPPC6AO75865 159 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 GAS8O95995 478 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 PLAUP00749 431 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 C1QAP02745 245 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 GYPCP04921 128 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 IFNA16P05015 189 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 SMIM10L1P0DMW3 83 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 THBS2P35442 1172 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 ACVR1BP36896 505 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 RGS1Q08116 209 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 RUNX2Q13950 521 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 ELAVL1Q15717 326 aaKnown RBP8.36□□□□□ -1.07
SSBP1-212ENST00000489378 PIGGQ5H8A4 983 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 BHLHB9Q6PI77 547 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 CYHR1Q6ZMK1 362 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 MBOAT1Q6ZNC8 495 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 BTLAQ7Z6A9 289 aa8.36□□□□□ -1.07
SSBP1-212ENST00000489378 TMEM132CQ8N3T6 1108 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms