RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 RNF175Q8N4F7 328 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 KIF2BQ8N4N8 673 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 FAM98AQ8NCA5 519 aaKnown RBP12.61□□□□□ -0.39
LMO4-203ENST00000489303 ST6GALNAC3Q8NDV1 305 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 MYRIPQ8NFW9 859 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 OR4F6Q8NGB9 312 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 OR14A16Q8NHC5 309 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 DNAJB8Q8NHS0 232 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 ZNF483Q8TF39 744 aaPredicted RBP12.61□□□□□ -0.39
LMO4-203ENST00000489303 TANKQ92844 425 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 NSUN5Q96P11 429 aaKnown RBP12.61□□□□□ -0.39
LMO4-203ENST00000489303 BARD1Q99728 777 aaKnown RBP12.61□□□□□ -0.39
LMO4-203ENST00000489303 C1QTNF3Q9BXJ4 246 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 ERVK-6Q9BXR3 956 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 EPB41L4BQ9H329 900 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 NMRK1Q9NWW6 199 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 VTI1BQ9UEU0 232 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 PPT2Q9UMR5 302 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 SNX6Q9UNH7 406 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 STK38LQ9Y2H1 464 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 PCDHGB6Q9Y5F9 930 aa12.61□□□□□ -0.39
LMO4-203ENST00000489303 ARHGAP10A1A4S6 786 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 SMIM23A6NLE4 172 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 LDB3O75112 727 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 GLRA3O75311 464 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 ZFAND5O76080 213 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 SEMA3DO95025 777 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 CD96P40200 585 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 CCT5P48643 541 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 CYB561P49447 251 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 CDH13P55290 713 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 MLF1P58340 268 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 CLCQ05315 142 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 TRAF3Q13114 568 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 SGO1Q5FBB7 561 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 PAGE2Q7Z2X7 111 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 TMEM178AQ8NBL3 297 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 MORN4Q8NDC4 146 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 TRPC4APQ8TEL6 797 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 NCLNQ969V3 563 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 TMEM125Q96AQ2 219 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 CCDC126Q96EE4 140 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 RBM18Q96H35 190 aaKnown RBP12.6□□□□□ -0.39
LMO4-203ENST00000489303 DGAT2Q96PD7 388 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 SORBS1Q9BX66 1292 aaKnown RBP12.6□□□□□ -0.39
LMO4-203ENST00000489303 RPF2Q9H7B2 306 aaKnown RBP12.6□□□□□ -0.39
LMO4-203ENST00000489303 DDX31Q9H8H2 851 aaKnown RBP12.6□□□□□ -0.39
LMO4-203ENST00000489303 ZBTB26Q9HCK0 441 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 ANKRD10Q9NXR5 420 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 LRFN1Q9P244 771 aa12.6□□□□□ -0.39
LMO4-203ENST00000489303 PPIEQ9UNP9 301 aaKnown RBP12.6□□□□□ -0.39
LMO4-203ENST00000489303 CACNA1DQ01668 2161 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 CCDC151A5D8V7 595 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 C17orf105B2RV13 164 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 MAN1A2O60476 641 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 MLYCDO95822 493 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 SBK3P0C264 359 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 FAM58BPP0C7Q3 252 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 IMPDH1P20839 514 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 TPP2P29144 1249 aaPredicted RBP12.59□□□□□ -0.39
LMO4-203ENST00000489303 BSGP35613 385 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 HSD17B3P37058 310 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 DCTP40126 519 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 SLCO1A2P46721 670 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 TNFRSF17Q02223 184 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 RASA2Q15283 850 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 ZNF678Q5SXM1 525 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 SPINK14Q6IE38 97 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 SLC25A25Q6KCM7 469 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 HSDL2Q6YN16 418 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 TDRPQ86YL5 185 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 TMEM151AQ8N4L1 468 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 TMEM156Q8N614 296 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 APCDD1LQ8NCL9 501 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 THAP3Q8WTV1 239 aaPredicted RBP12.59□□□□□ -0.39
LMO4-203ENST00000489303 SELENOMQ8WWX9 145 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 NPAS2Q99743 824 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 PELOQ9BRX2 385 aaKnown RBP12.59□□□□□ -0.39
LMO4-203ENST00000489303 COPS7AQ9UBW8 275 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 TRPS1Q9UHF7 1281 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 CLDN16Q9Y5I7 305 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 CNTRLQ7Z7A1 2325 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 NOTCH2Q04721 2471 aa12.59□□□□□ -0.39
LMO4-203ENST00000489303 A0A0A6YYD5 115 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 MYOCOSA0A1B0GUC4 107 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 TGFBR3LH3BV60 316 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 PROM1O43490 865 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 DLX3O60479 287 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 CDH16O75309 829 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 GUCY1B2O75343 617 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 EEDO75530 441 aaKnown RBP12.58□□□□□ -0.4
LMO4-203ENST00000489303 SLU7O95391 586 aaKnown RBP12.58□□□□□ -0.4
LMO4-203ENST00000489303 ETHE1O95571 254 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 KRT6AP02538 564 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 KRT6BP04259 564 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 SHBGP04278 402 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 NR2F6P10588 404 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 MYL2P10916 166 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 TSPAN8P19075 237 aa12.58□□□□□ -0.4
LMO4-203ENST00000489303 STT3AP46977 705 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms