RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 C1orf109Q9NX04 203 aa11.7□□□□□ -0.54
COL4A5-206ENST00000489230 VTI1BQ9UEU0 232 aa11.7□□□□□ -0.54
COL4A5-206ENST00000489230 HAO1Q9UJM8 370 aa11.7□□□□□ -0.54
COL4A5-206ENST00000489230 TMED5Q9Y3A6 229 aa11.7□□□□□ -0.54
COL4A5-206ENST00000489230 HS3ST3B1Q9Y662 390 aa11.7□□□□□ -0.54
COL4A5-206ENST00000489230 NSG1A0A0A6YYJ2 146 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 GNG14A0A1W2PPG7 69 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 DYNC1I1O14576 645 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 DYRK3O43781 588 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 VPS4BO75351 444 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 CDC123O75794 336 aaPredicted RBP11.69□□□□□ -0.54
COL4A5-206ENST00000489230 FURINP09958 794 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 DRD2P14416 443 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 TPP2P29144 1249 aaPredicted RBP11.69□□□□□ -0.54
COL4A5-206ENST00000489230 HK2P52789 917 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 OR4D2P58180 307 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 HMGCS1Q01581 520 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 BTKQ06187 659 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 BST1Q10588 318 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 ATP1A4Q13733 1029 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 HEPACAMQ14CZ8 416 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 EXT1Q16394 746 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 SCIMPQ6UWF3 145 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 RIPOR1Q6ZS17 1223 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 ANKRD37Q7Z713 158 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 C1orf52Q8N6N3 182 aaKnown RBP11.69□□□□□ -0.54
COL4A5-206ENST00000489230 EFCAB3Q8N7B9 438 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 OR11G2Q8NGC1 345 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 LRRC8CQ8TDW0 803 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 TWIST2Q8WVJ9 160 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 ZNF75CPQ92670 426 aaPredicted RBP11.69□□□□□ -0.54
COL4A5-206ENST00000489230 RBM18Q96H35 190 aaKnown RBP11.69□□□□□ -0.54
COL4A5-206ENST00000489230 PPP3R2Q96LZ3 170 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 LPAR4Q99677 370 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 PELOQ9BRX2 385 aaKnown RBP11.69□□□□□ -0.54
COL4A5-206ENST00000489230 SORBS1Q9BX66 1292 aaKnown RBP11.69□□□□□ -0.54
COL4A5-206ENST00000489230 TRIM4Q9C037 500 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 ADNPQ9H2P0 1102 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 LRTM1Q9HBL6 345 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 TUBD1Q9UJT1 453 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 FBXL4Q9UKA2 621 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 FIS1Q9Y3D6 152 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 ATG4BQ9Y4P1 393 aa11.69□□□□□ -0.54
COL4A5-206ENST00000489230 SPTA1P02549 2419 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 IGHV1-45A0A0A0MS14 117 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 A0A1W2PR48 441 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 TCRBV16S1A1N1A0A5B0 115 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 C1orf226A1L170 272 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 ARGFXA6NJG6 315 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 MKRN2OSH3BPM6 223 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 ITM2AO43736 263 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 TMPRSS11DO60235 418 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 PCDH7O60245 1069 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 SNNO75324 88 aaPredicted RBP11.68□□□□□ -0.54
COL4A5-206ENST00000489230 GPR75O95800 540 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 ANXA4P09525 319 aaPredicted RBP11.68□□□□□ -0.54
COL4A5-206ENST00000489230 LINC00032P0C843 101 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 NR2F6P10588 404 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 CHN1P15882 459 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 DDX5P17844 614 aaKnown RBP11.68□□□□□ -0.54
COL4A5-206ENST00000489230 MAPK1P28482 360 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 HTR6P50406 440 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 BTG2P78543 158 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 TNFRSF17Q02223 184 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 MAD2L1Q13257 205 aaPredicted RBP11.68□□□□□ -0.54
COL4A5-206ENST00000489230 TERF2Q15554 542 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 SMU1Q2TAY7 513 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 ATP1A1-AS1Q5TC04 95 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 FAAH2Q6GMR7 532 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 JMJD6Q6NYC1 403 aaPredicted RBP11.68□□□□□ -0.54
COL4A5-206ENST00000489230 Q6ZSR9 355 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 SCUBE1Q8IWY4 988 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 KBTBD2Q8IY47 623 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 LRRC34Q8IZ02 419 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 SAMD14Q8IZD0 417 aaPredicted RBP11.68□□□□□ -0.54
COL4A5-206ENST00000489230 TMEM132CQ8N3T6 1108 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 FAM47BQ8NA70 645 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 DAZLQ92904 295 aaKnown RBP11.68□□□□□ -0.54
COL4A5-206ENST00000489230 TM4SF18Q96CE8 201 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 APIPQ96GX9 242 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 HBEGFQ99075 208 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 ALOXE3Q9BYJ1 711 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 TNFRSF12AQ9NP84 129 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 PCDHGB7Q9Y5F8 929 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 SCN3AQ9NY46 2000 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 HECTD1Q9ULT8 2610 aa11.68□□□□□ -0.54
COL4A5-206ENST00000489230 IGKV3D-11A0A0A0MRZ8 115 aa11.67□□□□□ -0.54
COL4A5-206ENST00000489230 TRPC5OSA6NMA1 111 aa11.67□□□□□ -0.54
COL4A5-206ENST00000489230 LYPLA1O75608 230 aaPredicted RBP11.67□□□□□ -0.54
COL4A5-206ENST00000489230 GBAP04062 536 aa11.67□□□□□ -0.54
COL4A5-206ENST00000489230 IFNA16P05015 189 aa11.67□□□□□ -0.54
COL4A5-206ENST00000489230 ALPPP05187 535 aa11.67□□□□□ -0.54
COL4A5-206ENST00000489230 SERPINA7P05543 415 aa11.67□□□□□ -0.54
COL4A5-206ENST00000489230 COX7A2P14406 83 aa11.67□□□□□ -0.54
COL4A5-206ENST00000489230 TNNI3P19429 210 aa11.67□□□□□ -0.54
COL4A5-206ENST00000489230 NR1D1P20393 614 aa11.67□□□□□ -0.54
COL4A5-206ENST00000489230 MAOAP21397 527 aa11.67□□□□□ -0.54
COL4A5-206ENST00000489230 PIK3R1P27986 724 aa11.67□□□□□ -0.54
COL4A5-206ENST00000489230 TIA1P31483 386 aaKnown RBP eCLIP11.67□□□□□ -0.54
COL4A5-206ENST00000489230 CCL11P51671 97 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms