RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 MUC13Q9H3R2 512 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 RAD21L1Q9H4I0 556 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 RPF2Q9H7B2 306 aaKnown RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 CLK4Q9HAZ1 481 aaKnown RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 PRDM9Q9NQV7 894 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 FGF21Q9NSA1 209 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 SLC6A13Q9NSD5 602 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 CUTCQ9NTM9 273 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 ACSS1Q9NUB1 689 aaPredicted RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 TAS2R9Q9NYW1 312 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 CD300AQ9UGN4 299 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 SERTAD3Q9UJW9 196 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 DAPP1Q9UN19 280 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 MRPS33Q9Y291 106 aaKnown RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 SNX8Q9Y5X2 465 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 KMT2EQ8IZD2 1858 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 CEP192Q8TEP8 1941 aa9.46□□□□□ -0.89
USP11-211ENST00000489111 PCDH15Q96QU1 1955 aa9.46□□□□□ -0.89
USP11-211ENST00000489111 CLIC1O00299 241 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 PGRMC2O15173 223 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 GSTA4O15217 222 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 MGRN1O60291 552 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 ENTPD5O75356 428 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 BCAS2O75934 225 aaPredicted RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 NSA2O95478 260 aaKnown RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 LMNAP02545 664 aaKnown RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 FOLR1P15328 257 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 HOXB9P17482 250 aaPredicted RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 CSNK2A2P19784 350 aaPredicted RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 ACP1P24666 158 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 MSX2P35548 267 aaPredicted RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 SNRPNP63162 240 aaKnown RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 HBA1P69905 142 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 SIM1P81133 766 aaPredicted RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 SPEM2Q0P670 501 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 TRAP1Q12931 704 aaKnown RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 GAB1Q13480 694 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 RIPK1Q13546 671 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 COL9A2Q14055 689 aaPredicted RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 TRIM25Q14258 630 aaKnown RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 YOD1Q5VVQ6 348 aaPredicted RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 FBXW10Q5XX13 1052 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 FAM180BQ6P0A1 224 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 TLDC1Q6P9B6 456 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 TMPRSS9Q7Z410 1059 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 DHFR2Q86XF0 187 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 CA13Q8N1Q1 262 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 ARHGEF39Q8N4T4 335 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 HIPK4Q8NE63 616 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 PRSS33Q8NF86 280 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 BHLHE22Q8NFJ8 381 aaPredicted RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 OR2T12Q8NG77 320 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 OR5T3Q8NGG3 340 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 OR1L3Q8NH93 324 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 GOT1L1Q8NHS2 421 aaPredicted RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 MMABQ96EY8 250 aaPredicted RBP9.46□□□□□ -0.9
USP11-211ENST00000489111 PHF12Q96QT6 1004 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 CSF3RQ99062 836 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 LRFN3Q9BTN0 628 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 IRF2BPLQ9H1B7 796 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 PIF1Q9H611 641 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 TPT1P8Q9HAU6 139 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 SEMA3GQ9NS98 782 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 SEMA4GQ9NTN9 838 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 KCMF1Q9P0J7 381 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 HCN3Q9P1Z3 774 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 PDP2Q9P2J9 529 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 NDOR1Q9UHB4 597 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 MAGEL2Q9UJ55 1249 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 SRPK3Q9UPE1 567 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 NEUROG3Q9Y4Z2 214 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 SNX13Q9Y5W8 968 aa9.46□□□□□ -0.9
USP11-211ENST00000489111 RNF103-CHMP3A0A140T963 221 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 BLACEA4D250 179 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 MYO1GB0I1T2 1018 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 FAM220BPB1ANY3 271 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 ARPC2O15144 300 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 CASC3O15234 703 aaKnown RBP9.45□□□□□ -0.9
USP11-211ENST00000489111 CHST10O43529 356 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 FOXS1O43638 330 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 LRP3O75074 770 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 ATP6V1G2O95670 118 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 KRT75O95678 551 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 NTRK1P04629 796 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 UQCRC2P22695 453 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 PPP2R1BP30154 601 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 CSTF2P33240 577 aaKnown RBP eCLIP9.45□□□□□ -0.9
USP11-211ENST00000489111 MPIP34949 423 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 FRKP42685 505 aaPredicted RBP9.45□□□□□ -0.9
USP11-211ENST00000489111 ERFP50548 548 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 ARSFP54793 590 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 PCBP4P57723 403 aaKnown RBP9.45□□□□□ -0.9
USP11-211ENST00000489111 ABHD18Q0P651 414 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 TCF15Q12870 199 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 TRA2AQ13595 282 aaKnown RBP eCLIP9.45□□□□□ -0.9
USP11-211ENST00000489111 CCNIQ14094 377 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 MLC1Q15049 377 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 CSRP2Q16527 193 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 PRSS53Q2L4Q9 553 aa9.45□□□□□ -0.9
USP11-211ENST00000489111 ZNF574Q6ZN55 896 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms