RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 PPCDCQ96CD2 204 aa11.6□□□□□ -0.55
TRAIP-209ENST00000488860 NAF1Q96HR8 494 aaKnown RBP11.6□□□□□ -0.55
TRAIP-209ENST00000488860 SPRY4Q9C004 299 aa11.6□□□□□ -0.55
TRAIP-209ENST00000488860 BRINP2Q9C0B6 783 aa11.6□□□□□ -0.55
TRAIP-209ENST00000488860 NMUR2Q9GZQ4 415 aa11.6□□□□□ -0.55
TRAIP-209ENST00000488860 REEP4Q9H6H4 257 aa11.6□□□□□ -0.55
TRAIP-209ENST00000488860 PRTFDC1Q9NRG1 225 aa11.6□□□□□ -0.55
TRAIP-209ENST00000488860 MKL2Q9ULH7 1088 aa11.6□□□□□ -0.55
TRAIP-209ENST00000488860 PADI2Q9Y2J8 665 aa11.6□□□□□ -0.55
TRAIP-209ENST00000488860 PTRH2Q9Y3E5 179 aaKnown RBP11.6□□□□□ -0.55
TRAIP-209ENST00000488860 PCDHA9Q9Y5H5 950 aa11.6□□□□□ -0.55
TRAIP-209ENST00000488860 AKAP13Q12802 2813 aa11.6□□□□□ -0.55
TRAIP-209ENST00000488860 LOC101059948A0A1B0GTJ6 334 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 MYOCOSA0A1B0GUC4 107 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 OR2W5A6NFC9 320 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 WASHC1A8K0Z3 465 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 NR5A2O00482 541 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 CLDN4O14493 209 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 FCHO1O14526 889 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 PGRMC2O15173 223 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 SLC22A3O75751 556 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 ALBP02768 609 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 HEXBP07686 556 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 FURINP09958 794 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 DRD2P14416 443 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 PRPS1L1P21108 318 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 MAOAP21397 527 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 IL10P22301 178 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 RPL3P39023 403 aaKnown RBP11.59□□□□□ -0.55
TRAIP-209ENST00000488860 FOLR3P41439 243 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 ATP4BP51164 291 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 CLNS1AP54105 237 aaKnown RBP11.59□□□□□ -0.55
TRAIP-209ENST00000488860 CLDN8P56748 225 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 PCBP4P57723 403 aaKnown RBP11.59□□□□□ -0.55
TRAIP-209ENST00000488860 RPS18P62269 152 aaKnown RBP11.59□□□□□ -0.55
TRAIP-209ENST00000488860 RPS15P62841 145 aaKnown RBP11.59□□□□□ -0.55
TRAIP-209ENST00000488860 BTG2P78543 158 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 TGIF1Q15583 401 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 PGS1Q32NB8 556 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 AGKQ53H12 422 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 METTL21CQ5VZV1 264 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 MRPL14Q6P1L8 145 aaKnown RBP11.59□□□□□ -0.55
TRAIP-209ENST00000488860 R3HCC1LQ7Z5L2 792 aaKnown RBP11.59□□□□□ -0.55
TRAIP-209ENST00000488860 OR4N5Q8IXE1 308 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 ZNF595Q8IYB9 648 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 OR7A2PQ8NGA2 310 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 NUDT8Q8WV74 236 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 STARD8Q92502 1023 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 NKD1Q969G9 470 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 KIAA1143Q96AT1 154 aaPredicted RBP11.59□□□□□ -0.55
TRAIP-209ENST00000488860 TEX37Q96LM6 180 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 SPSB2Q99619 263 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 CRB3Q9BUF7 120 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 ACTL8Q9H568 366 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 ZNF385DQ9H6B1 395 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 LANCL2Q9NS86 450 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 ZIM2Q9NZV7 527 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 SH3BP4Q9P0V3 963 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 ARMCX1Q9P291 453 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 NXT1Q9UKK6 140 aaKnown RBP11.59□□□□□ -0.55
TRAIP-209ENST00000488860 UTS2RQ9UKP6 389 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 ACSL6Q9UKU0 697 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 ANGPTL2Q9UKU9 493 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 ENTPD4Q9Y227 616 aa11.59□□□□□ -0.55
TRAIP-209ENST00000488860 IGLV3-12A0A075B6K2 115 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 BLACEA4D250 179 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.58□□□□□ -0.56
TRAIP-209ENST00000488860 FGF17O60258 216 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 PRMT3O60678 531 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 CCDC22O60826 627 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 DCTN3O75935 186 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 ONECUT2O95948 504 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 RAB40ALP0C0E4 278 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 C8orf89P0DMQ9 161 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 GPX3P22352 226 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 PIK3R1P27986 724 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 IL12AP29459 219 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 PPP2R1BP30154 601 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 NTSP30990 170 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 FOLH1Q04609 750 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 STX4Q12846 297 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 UGT8Q16880 541 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 ZNF385BQ569K4 471 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 SLC48A1Q6P1K1 146 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 ZNF517Q6ZMY9 492 aaPredicted RBP11.58□□□□□ -0.56
TRAIP-209ENST00000488860 GK5Q6ZS86 529 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 MTDHQ86UE4 582 aaKnown RBP11.58□□□□□ -0.56
TRAIP-209ENST00000488860 VASH2Q86V25 355 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 LAPTM4BQ86VI4 370 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 TMEM151BQ8IW70 566 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 ANKS4BQ8N8V4 417 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRAIP-209ENST00000488860 DNAJB14Q8TBM8 379 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 TSLPQ969D9 159 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 CIDECQ96AQ7 238 aaPredicted RBP11.58□□□□□ -0.56
TRAIP-209ENST00000488860 PTCHD1Q96NR3 888 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 TGIF2Q9GZN2 237 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 VN1R1Q9GZP7 353 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 SLC26A1Q9H2B4 701 aa11.58□□□□□ -0.56
TRAIP-209ENST00000488860 WDR54Q9H977 334 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms