RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 CACNA1EQ15878 2313 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 C1orf226A1L170 272 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 RNASET2O00584 256 aaKnown RBP11.55□□□□□ -0.56
HDAC6-230ENST00000488543 CCNDBP1O95273 360 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 RECKO95980 971 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 VIPP01282 170 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 UMPSP11172 480 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 FCGR1AP12314 374 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 ENGP17813 658 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 ABHD18Q0P651 414 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 HYAL2Q12891 473 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 GAB1Q13480 694 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 COL9A2Q14055 689 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-230ENST00000488543 ANXA8L1Q5VT79 327 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 IKBIPQ70UQ0 350 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 GALNT10Q86SR1 603 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 TRIM48Q8IWZ4 208 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 AMER3Q8N944 861 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 TBC1D15Q8TC07 691 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 PIGKQ92643 395 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 TM4SF18Q96CE8 201 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 FAM120BQ96EK7 910 aaKnown RBP11.55□□□□□ -0.56
HDAC6-230ENST00000488543 DGCR6LQ9BY27 220 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 LHPPQ9H008 270 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 ING2Q9H160 280 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 DOLKQ9UPQ8 538 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 GPR179Q6PRD1 2367 aa11.55□□□□□ -0.56
HDAC6-230ENST00000488543 FAM86C2PA6NEL3 165 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 TRIM64A6NGJ6 449 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 ISM1B1AKI9 464 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 C4orf51C9J302 202 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 CLIC1O00299 241 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 PPM1DO15297 605 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 CAPN5O15484 640 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-230ENST00000488543 HNRNPCP07910 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
HDAC6-230ENST00000488543 CMPK1P30085 196 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 MAZP56270 477 aaKnown RBP11.54□□□□□ -0.56
HDAC6-230ENST00000488543 UBE2IP63279 158 aaKnown RBP11.54□□□□□ -0.56
HDAC6-230ENST00000488543 CTU2Q2VPK5 515 aaKnown RBP11.54□□□□□ -0.56
HDAC6-230ENST00000488543 CCNYL2Q5T2Q4 361 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 ZNF621Q6ZSS3 439 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 R3HCC1LQ7Z5L2 792 aaKnown RBP11.54□□□□□ -0.56
HDAC6-230ENST00000488543 PAQR7Q86WK9 346 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 GOT1L1Q8NHS2 421 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-230ENST00000488543 CIDECQ96AQ7 238 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-230ENST00000488543 PPCDCQ96CD2 204 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 MTERF3Q96E29 417 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 REXO5Q96IC2 774 aaKnown RBP11.54□□□□□ -0.56
HDAC6-230ENST00000488543 CSF3RQ99062 836 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 SRMSQ9H3Y6 488 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 CORINQ9Y5Q5 1042 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 GMEB1Q9Y692 573 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 LRIT2A6NDA9 550 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 CXCR6O00574 342 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 GSTA4O15217 222 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 TMPRSS11DO60235 418 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 STATHP02808 62 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 ALPLP05186 524 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 THRBP10828 461 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 GPX2P18283 190 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 DCKP27707 260 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 RPL3P39023 403 aaKnown RBP11.54□□□□□ -0.56
HDAC6-230ENST00000488543 NUP107P57740 925 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 DAG1Q14118 895 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 ELOCQ15369 112 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 SPESP1Q6UW49 350 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 ZNF438Q7Z4V0 828 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 ALDH16A1Q8IZ83 802 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 MFSD9Q8NBP5 474 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 TTLQ8NG68 377 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 OR52E4Q8NGH9 312 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 GIPC3Q8TF64 312 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 RGMAQ96B86 450 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 TEFMQ96QE5 360 aaKnown RBP11.54□□□□□ -0.56
HDAC6-230ENST00000488543 MBOAT4Q96T53 435 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 AMBRA1Q9C0C7 1298 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 KLHL31Q9H511 634 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 TUBA8Q9NY65 449 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-230ENST00000488543 PILRBQ9UKJ0 227 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 AP1M2Q9Y6Q5 423 aa11.54□□□□□ -0.56
HDAC6-230ENST00000488543 OR6C74A6NCV1 312 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 PATE3B3GLJ2 98 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 AQP9O43315 295 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 PRKD3O94806 890 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 SCELO95171 688 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 EPN2O95208 641 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 ZBTB11O95625 1053 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-230ENST00000488543 HTR1AP08908 422 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 MYF5P13349 255 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 POLR2CP19387 275 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-230ENST00000488543 AVPR2P30518 371 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 AHRP35869 848 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 HHEXQ03014 270 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 ATP1A4Q13733 1029 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 ADPRMQ3LIE5 342 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 XAF1Q6GPH4 301 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 DHRS4L2Q6PKH6 230 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 PIWIL3Q7Z3Z3 882 aaKnown RBP11.53□□□□□ -0.56
HDAC6-230ENST00000488543 SERPINA11Q86U17 422 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 ZZZ3Q8IYH5 903 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms