RNA–Protein interactions for RNA: ENST00000488293.4

MECP2-210, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-210ENST00000488293 SRSF11Q05519 484 aaKnown RBP12.4□□□□□ -0.42
MECP2-210ENST00000488293 SLAMF1Q13291 335 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 CUL3Q13618 768 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 ZRSR2Q15696 482 aaKnown RBP12.4□□□□□ -0.42
MECP2-210ENST00000488293 LGSNQ5TDP6 509 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 HIST2H2BCQ6DN03 193 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 HSDL2Q6YN16 418 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 GPR180Q86V85 440 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 IFT20Q8IY31 132 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 RNF175Q8N4F7 328 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 POGLUT1Q8NBL1 392 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 OR8K3Q8NH51 312 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 ANKRD9Q96BM1 317 aaPredicted RBP12.4□□□□□ -0.42
MECP2-210ENST00000488293 SCYL1Q96KG9 808 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 GPR137Q96N19 417 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 RPF2Q9H7B2 306 aaKnown RBP12.4□□□□□ -0.42
MECP2-210ENST00000488293 NOL11Q9H8H0 719 aaKnown RBP12.4□□□□□ -0.42
MECP2-210ENST00000488293 XPR1Q9UBH6 696 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 PHF11Q9UIL8 331 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 PPT2Q9UMR5 302 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 RNF11Q9Y3C5 154 aa12.4□□□□□ -0.42
MECP2-210ENST00000488293 CELSR2Q9HCU4 2923 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 CACNA1DQ01668 2161 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 TRGV8A0A0C4DH27 118 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 EXOC1LA0A1B0GW35 172 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 TRIM49D1C9J1S8 452 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 NPIPA5E9PKD4 350 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 KLRC4-KLRK1H3BQV0 150 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 PLPP1O14494 284 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 OR7A17O14581 309 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 SNRPAP09012 282 aaKnown RBP12.39□□□□□ -0.43
MECP2-210ENST00000488293 CA7P43166 264 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 SSR4P51571 173 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 CASP6P55212 293 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 C10orf62Q5T681 223 aaPredicted RBP12.39□□□□□ -0.43
MECP2-210ENST00000488293 MTFR2Q6P444 385 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 TRMT10CQ7L0Y3 403 aaKnown RBP12.39□□□□□ -0.43
MECP2-210ENST00000488293 SIAH3Q8IW03 269 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 GPALPP1Q8IXQ4 340 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 CYP4Z2PQ8N1L4 340 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 UHMK1Q8TAS1 419 aaKnown RBP12.39□□□□□ -0.43
MECP2-210ENST00000488293 WDR20Q8TBZ3 569 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 TANKQ92844 425 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 ATP6V1E2Q96A05 226 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 PHF21BQ96EK2 531 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 MRPL57Q9BQC6 102 aaKnown RBP12.39□□□□□ -0.43
MECP2-210ENST00000488293 NTMT1Q9BV86 223 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 SORBS1Q9BX66 1292 aaKnown RBP12.39□□□□□ -0.43
MECP2-210ENST00000488293 OR8D2Q9GZM6 311 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 MRPL46Q9H2W6 279 aaKnown RBP12.39□□□□□ -0.43
MECP2-210ENST00000488293 DDX31Q9H8H2 851 aaKnown RBP12.39□□□□□ -0.43
MECP2-210ENST00000488293 MYOTQ9UBF9 498 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 SUCOQ9UBS9 1254 aaKnown RBP12.39□□□□□ -0.43
MECP2-210ENST00000488293 NFU1Q9UMS0 254 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 NPIPA1Q9UND3 350 aa12.39□□□□□ -0.43
MECP2-210ENST00000488293 PCNX1Q96RV3 2341 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 TMEM200CA6NKL6 621 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 CCL21O00585 134 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 PROM1O43490 865 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 ASNA1O43681 348 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 PRKNO60260 465 aaPredicted RBP12.38□□□□□ -0.43
MECP2-210ENST00000488293 SLC19A2O60779 497 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 ZG16O60844 167 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 WISP2O76076 250 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 COX7A2P14406 83 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 BSGP35613 385 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 BUD31P41223 144 aaPredicted RBP12.38□□□□□ -0.43
MECP2-210ENST00000488293 STT3AP46977 705 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 CCNG1P51959 295 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 TNFRSF17Q02223 184 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 ADGRD1Q6QNK2 874 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 CNPY4Q8N129 248 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 CPSF7Q8N684 471 aaKnown RBP12.38□□□□□ -0.43
MECP2-210ENST00000488293 OR52B6Q8NGF0 335 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 OR5L2Q8NGL0 311 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 SLC2A12Q8TD20 617 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 MTBPQ96DY7 904 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 RBM18Q96H35 190 aaKnown RBP12.38□□□□□ -0.43
MECP2-210ENST00000488293 SERPINI1Q99574 410 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 ZNF717Q9BY31 904 aaPredicted RBP12.38□□□□□ -0.43
MECP2-210ENST00000488293 TIMMDC1Q9NPL8 285 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 LYARQ9NX58 379 aaKnown RBP12.38□□□□□ -0.43
MECP2-210ENST00000488293 COPS7AQ9UBW8 275 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 PCTPQ9UKL6 214 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 ZNF835Q9Y2P0 537 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 ATG4BQ9Y4P1 393 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 ITPR2Q14571 2701 aa12.38□□□□□ -0.43
MECP2-210ENST00000488293 NCOA6Q14686 2063 aaPredicted RBP12.38□□□□□ -0.43
MECP2-210ENST00000488293 TEX15Q9BXT5 2789 aa12.37□□□□□ -0.43
MECP2-210ENST00000488293 A0A0A6YYD5 115 aa12.37□□□□□ -0.43
MECP2-210ENST00000488293 MYOCOSA0A1B0GUC4 107 aa12.37□□□□□ -0.43
MECP2-210ENST00000488293 DYRK3O43781 588 aa12.37□□□□□ -0.43
MECP2-210ENST00000488293 PEX1O43933 1283 aa12.37□□□□□ -0.43
MECP2-210ENST00000488293 FGF17O60258 216 aa12.37□□□□□ -0.43
MECP2-210ENST00000488293 OR2J2O76002 312 aa12.37□□□□□ -0.43
MECP2-210ENST00000488293 SEMA3DO95025 777 aa12.37□□□□□ -0.43
MECP2-210ENST00000488293 ETHE1O95571 254 aa12.37□□□□□ -0.43
MECP2-210ENST00000488293 ZNF24P17028 368 aa12.37□□□□□ -0.43
MECP2-210ENST00000488293 ARL1P40616 181 aaPredicted RBP12.37□□□□□ -0.43
MECP2-210ENST00000488293 MEOX1P50221 254 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms