RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 BUD31P41223 144 aaPredicted RBP10.37□□□□□ -0.75
UBE4B-210ENST00000488228 RPL14P50914 215 aaKnown RBP10.37□□□□□ -0.75
UBE4B-210ENST00000488228 PCOLCEQ15113 449 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 NSDHLQ15738 373 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 SFT2D3Q587I9 215 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 DCAF10Q5QP82 559 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 NDUFAF5Q5TEU4 345 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 ATG16L1Q676U5 607 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 BORAQ6PGQ7 559 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 Q6ZSR9 355 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 OR4N5Q8IXE1 308 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 ZNF595Q8IYB9 648 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 LRRC8CQ8TDW0 803 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 THAP4Q8WY91 577 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 ZNF75CPQ92670 426 aaPredicted RBP10.37□□□□□ -0.75
UBE4B-210ENST00000488228 C11orf24Q96F05 449 aaPredicted RBP10.37□□□□□ -0.75
UBE4B-210ENST00000488228 CATSPER2Q96P56 530 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 C1orf50Q9BV19 199 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 NUF2Q9BZD4 464 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 LRTM1Q9HBL6 345 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 SLCO1B3Q9NPD5 702 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 MED4Q9NPJ6 270 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 THAP1Q9NVV9 213 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 C1orf109Q9NX04 203 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 C5AR2Q9P296 337 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 C19orf25Q9UFG5 118 aaPredicted RBP10.37□□□□□ -0.75
UBE4B-210ENST00000488228 MCM8Q9UJA3 840 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 HAO1Q9UJM8 370 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 LHX6Q9UPM6 363 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 DLGAP4Q9Y2H0 992 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 KCNMB2Q9Y691 235 aa10.37□□□□□ -0.75
UBE4B-210ENST00000488228 SPTA1P02549 2419 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 BOD1L1Q8NFC6 3051 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 EXPH5Q8NEV8 1989 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 LOC102723996A0A087X1L8 192 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 A0A1W2PQ72 361 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 A0A1W2PS29 197 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 TCRBV16S1A1N1A0A5B0 115 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 WASHC1A8K0Z3 465 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 A8MUA0 341 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 CLDN4O14493 209 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 KLF11O14901 512 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 PROM1O43490 865 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 ATP8B1O43520 1251 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 SEC22BO75396 215 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 CYC1P08574 325 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 ANXA4P09525 319 aaPredicted RBP10.36□□□□□ -0.75
UBE4B-210ENST00000488228 FAM87AP0C7U9 286 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 KITP10721 976 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 PRPH2P23942 346 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 TACR1P25103 407 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 HK2P52789 917 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 HSD17B7P56937 341 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 OR4D2P58180 307 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 TAS2R50P59544 299 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 FOLH1Q04609 750 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 ZNF763Q0D2J5 394 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 RAPSNQ13702 412 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 OR52E8Q6IFG1 317 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 GALNT18Q6P9A2 607 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 PAPD4Q6PIY7 484 aaKnown RBP10.36□□□□□ -0.75
UBE4B-210ENST00000488228 FAM47EQ6ZV65 393 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 MED25Q71SY5 747 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 CPEB2Q7Z5Q1 589 aaKnown RBP10.36□□□□□ -0.75
UBE4B-210ENST00000488228 PLPP5Q8NEB5 264 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 CLHC1Q8NHS4 586 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 TTC9Q92623 222 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 TM4SF18Q96CE8 201 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 IP6K3Q96PC2 410 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 WDR77Q9BQA1 342 aaPredicted RBP10.36□□□□□ -0.75
UBE4B-210ENST00000488228 ING2Q9H160 280 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 RPF2Q9H7B2 306 aaKnown RBP10.36□□□□□ -0.75
UBE4B-210ENST00000488228 MS4A12Q9NXJ0 267 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 HEY2Q9UBP5 337 aa10.36□□□□□ -0.75
UBE4B-210ENST00000488228 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.36□□□□□ -0.75
UBE4B-210ENST00000488228 NSG1A0A0A6YYJ2 146 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 A6NL46 340 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 NPIPB8E9PQR5 432 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 PGRMC2O15173 223 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 CTNSO60931 367 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 PEX11AO75192 247 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 MYO1DO94832 1006 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 SNUPNO95149 360 aaKnown RBP10.35□□□□□ -0.75
UBE4B-210ENST00000488228 HPP00738 406 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 ITGB2P05107 769 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 SDC1P18827 310 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 TLX1P31314 330 aaPredicted RBP10.35□□□□□ -0.75
UBE4B-210ENST00000488228 ALDH9A1P49189 494 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 POLE2P56282 527 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 Q0VFX4 171 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 STX4Q12846 297 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 KIAA0040Q15053 153 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 LINC00303Q3SY05 128 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 ATP6AP1LQ52LC2 224 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 RFTN2Q52LD8 501 aaPredicted RBP10.35□□□□□ -0.75
UBE4B-210ENST00000488228 VWA5B1Q5TIE3 1220 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 NOXRED1Q6NXP6 359 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 FAM180BQ6P0A1 224 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 NDUFAF7Q7L592 441 aa10.35□□□□□ -0.75
UBE4B-210ENST00000488228 MAVSQ7Z434 540 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms