RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 PSMD3O43242 534 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 NXPH4O95158 308 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 MMP10P09238 476 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 CALML3P27482 149 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZFP36L2P47974 494 aaKnown RBP3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 NUMBP49757 651 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 FHITP49789 147 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 TNFSF10P50591 281 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 SMSP52788 366 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 PEX3P56589 373 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 BACE1P56817 501 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 BTG1P62324 171 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 GFPT1Q06210 699 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 ACTN3Q08043 901 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 MEF2DQ14814 521 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 SGCBQ16585 318 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 CCDC184Q52MB2 194 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 MPPE1Q53F39 396 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 MUC21Q5SSG8 566 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 TMUB2Q71RG4 321 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 MCM10Q7L590 875 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZNF410Q86VK4 478 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 PEX5LQ8IYB4 626 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 SPAG16Q8N0X2 631 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZNF713Q8N859 430 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 MGARPQ8TDB4 240 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 PCNPQ8WW12 178 aaKnown RBP3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 LIPHQ8WWY8 451 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 SNX21Q969T3 373 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 PDLIM5Q96HC4 596 aaKnown RBP3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 RPGRIP1Q96KN7 1286 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 PRICKLE1Q96MT3 831 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 ALKBH3Q96Q83 286 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 OCR1Q9BZK8 76 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 DDX47Q9H0S4 455 aaKnown RBP3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 TRPV6Q9H1D0 765 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 PARLQ9H300 379 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 FNDC4Q9H6D8 234 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 DCLRE1BQ9H816 532 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 PNPLA3Q9NST1 481 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 NARFQ9UHQ1 456 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 PILRAQ9UKJ1 303 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 TSPAN16Q9UKR8 245 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 TDRKHQ9Y2W6 561 aaKnown RBP3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 MRPS18CQ9Y3D5 142 aaKnown RBP3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 ARID2Q68CP9 1835 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 NEDD4P46934 1319 aa3.13□□□□□ -1.91
HMGB1P36-201ENST00000487709 ATP6AP2A0A1C7CYW4 349 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 GTPBP10A4D1E9 387 aaKnown RBP3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 SLC28A1O00337 649 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 SOCS3O14543 225 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 P2RX6O15547 441 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZBTB14O43829 449 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 KINO60870 393 aaKnown RBP3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 NME6O75414 186 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 CRLF1O75462 422 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 ANXA9O76027 345 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 EPOP01588 193 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 CHRNGP07510 517 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 AREGP15514 252 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 CYP3A5P20815 502 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 EDNRAP25101 427 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 SLC12A3P55017 1021 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 CASP9P55211 416 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 SLC8A3P57103 927 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 SSTP61278 116 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 CCZ1BP86790 482 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 CCZ1P86791 482 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 NFATC2Q13469 925 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 RTL6Q6ICC9 239 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 CWC27Q6UX04 472 aaKnown RBP3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 OR4N5Q8IXE1 308 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 BATF2Q8N1L9 274 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 GVQW1Q8N7I0 195 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 BANPQ8N9N5 519 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 OR2L2Q8NH16 312 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 MIPOL1Q8TD10 442 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 GPR148Q8TDV2 347 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 U2AF1L4Q8WU68 220 aaKnown RBP3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 UBTD2Q8WUN7 234 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 GLYATL1Q969I3 302 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 RBM18Q96H35 190 aaKnown RBP3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 TNFRSF13CQ96RJ3 184 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 AGPAT1Q99943 283 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 VGLL1Q99990 258 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 CABLES2Q9BTV7 478 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 NUSAP1Q9BXS6 441 aaKnown RBP3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 WWP1Q9H0M0 922 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 ABCG8Q9H221 673 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 JPT2Q9H910 190 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 DBNDD1Q9H9R9 158 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 WDR41Q9HAD4 459 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 PLEKHA3Q9HB20 300 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 ELL3Q9HB65 397 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 DNAJC11Q9NVH1 559 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 VPS54Q9P1Q0 977 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 ERVK-18Q9QC07 812 aa3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 EIF3KQ9UBQ5 218 aaKnown RBP3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 MRPS2Q9Y399 296 aaKnown RBP3.12□□□□□ -1.91
HMGB1P36-201ENST00000487709 IGLV4-3A0A075B6K6 122 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms