RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ZNF77Q15935 545 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 UGT8Q16880 541 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 PROX2Q3B8N5 592 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF404Q494X3 552 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 CRTC2Q53ET0 693 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-214ENST00000487615 DUS1LQ6P1R4 473 aaKnown RBP11.28□□□□□ -0.6
TRA2B-214ENST00000487615 AMIGO1Q86WK6 493 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 LILRA3Q8N6C8 439 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-214ENST00000487615 OR8K5Q8NH50 307 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 NR4A3Q92570 626 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 UFD1Q92890 307 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF300Q96RE9 604 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-214ENST00000487615 RMI1Q9H9A7 625 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 FZD3Q9NPG1 666 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF624Q9P2J8 865 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-214ENST00000487615 ANHXE9PGG2 379 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 HAT1O14929 419 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 ACOX3O15254 700 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF821O75541 412 aaPredicted RBP11.27□□□□□ -0.6
TRA2B-214ENST00000487615 PIM1P11309 404 aaPredicted RBP11.27□□□□□ -0.6
TRA2B-214ENST00000487615 DDCP20711 480 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 AGXTP21549 392 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 CSTF2P33240 577 aaKnown RBP eCLIP11.27□□□□□ -0.6
TRA2B-214ENST00000487615 CRISP1P54107 249 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 TAP2Q03519 686 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 CLCA4Q14CN2 919 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 FAM78AQ5JUQ0 283 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 SLCO4C1Q6ZQN7 724 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 ADGRD2Q7Z7M1 963 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 KLHDC8AQ8IYD2 350 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 OR4K14Q8NGD5 310 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 ARRDC3Q96B67 414 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 SLCO4A1Q96BD0 722 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 TAMM41Q96BW9 452 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 ARMC5Q96C12 935 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 SPACA7Q96KW9 195 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 EPHX3Q9H6B9 360 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 PREBQ9HCU5 417 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 SLC35C2Q9NQQ7 365 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 SNTG1Q9NSN8 517 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 ABCG2Q9UNQ0 655 aa11.27□□□□□ -0.6
TRA2B-214ENST00000487615 CCDC182A6NF36 153 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 H3BMQ9 156 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 HBA1P69905 142 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 TRAM2Q15035 370 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 NDUFAF5Q5TEU4 345 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 CYHR1Q6ZMK1 362 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 ASPGQ86U10 573 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 TMC8Q8IU68 726 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 OR4C6Q8NH72 309 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 ZNF675Q8TD23 568 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 NUDT8Q8WV74 236 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 COG8Q96MW5 612 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 UHRF1Q96T88 793 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-214ENST00000487615 KCNS3Q9BQ31 491 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 PALMDQ9NP74 551 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 TMEM184CQ9NVA4 438 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 MRTO4Q9UKD2 239 aaKnown RBP11.27□□□□□ -0.61
TRA2B-214ENST00000487615 LIPT1Q9Y234 373 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 OR51B4Q9Y5P0 310 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 GFYI3L273 518 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 FOXE1O00358 373 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-214ENST00000487615 KIAA0355O15063 1070 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 EMC8O43402 210 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 AZGP1P25311 298 aaKnown RBP11.27□□□□□ -0.61
TRA2B-214ENST00000487615 MINDY4Q4G0A6 757 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 FAM220AQ7Z4H9 259 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 OR56A3Q8NH54 315 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 EPYCQ99645 322 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 MND1Q9BWT6 205 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 SLC6A16Q9GZN6 736 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 SCN10AQ9Y5Y9 1956 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 CPSF4LA6NMK7 179 aaKnown RBP11.27□□□□□ -0.61
TRA2B-214ENST00000487615 FOXD2O60548 495 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-214ENST00000487615 VNN2O95498 520 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 ATG14Q6ZNE5 492 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 PRSS48Q7RTY5 328 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 SPARTQ8N0X7 666 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 CHDHQ8NE62 594 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-214ENST00000487615 NUP43Q8NFH3 380 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 SUN3Q8TAQ9 357 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 JPH3Q8WXH2 748 aaPredicted RBP11.27□□□□□ -0.61
TRA2B-214ENST00000487615 PIK3R3Q92569 461 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 PPP1R14BQ96C90 147 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 IFT27Q9BW83 186 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 SORBS1Q9BX66 1292 aaKnown RBP11.27□□□□□ -0.61
TRA2B-214ENST00000487615 MARK1Q9P0L2 795 aa11.27□□□□□ -0.61
TRA2B-214ENST00000487615 TDRD15B5MCY1 1934 aaKnown RBP11.26□□□□□ -0.61
TRA2B-214ENST00000487615 PTPRFP10586 1907 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 GPR89AB7ZAQ6 455 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 FAM47E-STBD1D6RA91 191 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 SLC25A12O75746 678 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 GPR89BP0CG08 455 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 CD1EP15812 388 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 CRHBPP24387 322 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 SDC2P34741 201 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 LBX1P52954 281 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 SNAP47Q5SQN1 464 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 ADIPOR2Q86V24 386 aa11.26□□□□□ -0.61
TRA2B-214ENST00000487615 LMNTD1Q8N9Z9 388 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms