RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 NTMT1Q9BV86 223 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 ZNF717Q9BY31 904 aaPredicted RBP10.67□□□□□ -0.7
SPEN-205ENST00000487496 TXLNGYQ9BZA5 131 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 MRPL46Q9H2W6 279 aaKnown RBP10.67□□□□□ -0.7
SPEN-205ENST00000487496 ZBTB26Q9HCK0 441 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 MS4A12Q9NXJ0 267 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 PSD3Q9NYI0 1048 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 SEC14L3Q9UDX4 400 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 PCTPQ9UKL6 214 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 CLCA3PQ9Y6N3 262 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 ZGRF1Q86YA3 2104 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 A1L4Q6 167 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 TMEM200CA6NKL6 621 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 FOXE1O00358 373 aaPredicted RBP10.66□□□□□ -0.7
SPEN-205ENST00000487496 FGF17O60258 216 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 PRKNO60260 465 aaPredicted RBP10.66□□□□□ -0.7
SPEN-205ENST00000487496 NME2P1O60361 137 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 SLC25A12O75746 678 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 TNNI3P19429 210 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 NME2P22392 152 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 BSGP35613 385 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 ARL1P40616 181 aaPredicted RBP10.66□□□□□ -0.7
SPEN-205ENST00000487496 HNRNPH2P55795 449 aaKnown RBP10.66□□□□□ -0.7
SPEN-205ENST00000487496 TRAF3Q13114 568 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 MRM1Q6IN84 353 aaKnown RBP10.66□□□□□ -0.7
SPEN-205ENST00000487496 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.66□□□□□ -0.7
SPEN-205ENST00000487496 GPR180Q86V85 440 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 OR4N5Q8IXE1 308 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 MORN4Q8NDC4 146 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 OR14A16Q8NHC5 309 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 TANKQ92844 425 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 MTFMTQ96DP5 389 aaKnown RBP10.66□□□□□ -0.7
SPEN-205ENST00000487496 FRMD6Q96NE9 622 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 CCDC77Q9BR77 488 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 EPB41L4BQ9H329 900 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 RPF2Q9H7B2 306 aaKnown RBP10.66□□□□□ -0.7
SPEN-205ENST00000487496 SEMA4BQ9NPR2 832 aaPredicted RBP10.66□□□□□ -0.7
SPEN-205ENST00000487496 TMEM216Q9P0N5 145 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 PHF11Q9UIL8 331 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 PPT2Q9UMR5 302 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 ATG4BQ9Y4P1 393 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 ASB4Q9Y574 426 aa10.66□□□□□ -0.7
SPEN-205ENST00000487496 DOPEY1Q5JWR5 2465 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 A0A0A6YYD5 115 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 A0A1B0GTL3 188 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 A0A1B0GUH1 482 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 A8MT66 165 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 C17orf105B2RV13 164 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 PROM1O43490 865 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 TMPRSS11DO60235 418 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 EEDO75530 441 aaKnown RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 PRKRAO75569 313 aaKnown RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 ITGA10O75578 1167 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 RPS17P08708 135 aaKnown RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 CDH13P55290 713 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 IGLV3-21P80748 117 aaPredicted RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 TNFRSF17Q02223 184 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 GGTA1PQ4G0N0 100 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 FRG2Q64ET8 278 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 C18orf63Q68DL7 685 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 HIST2H2BCQ6DN03 193 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 HSDL2Q6YN16 418 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 C16orf47Q6ZP98 133 aaPredicted RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 RPS27LQ71UM5 84 aaKnown RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 MILR1Q7Z6M3 343 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 NUDT13Q86X67 352 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 GSPT2Q8IYD1 628 aaKnown RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 TMEM156Q8N614 296 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 ZNF321PQ8N8H1 164 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 FAM98AQ8NCA5 519 aaKnown RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 C7orf57Q8NEG2 295 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 OR4F6Q8NGB9 312 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 SLC2A12Q8TD20 617 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 ZNF483Q8TF39 744 aaPredicted RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 RELTQ969Z4 430 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 TMEM125Q96AQ2 219 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 RBM18Q96H35 190 aaKnown RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 FRG2BQ96QU4 278 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 SERPINI1Q99574 410 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 C1QTNF3Q9BXJ4 246 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 OR8D2Q9GZM6 311 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 DDX31Q9H8H2 851 aaKnown RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 LIN28AQ9H9Z2 209 aaKnown RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 LYARQ9NX58 379 aaKnown RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 MYOTQ9UBF9 498 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 FETUBQ9UGM5 382 aa10.65□□□□□ -0.7
SPEN-205ENST00000487496 YARS2Q9Y2Z4 477 aaKnown RBP10.65□□□□□ -0.7
SPEN-205ENST00000487496 IQANK1A0A1B0GTG1 560 aa10.64□□□□□ -0.71
SPEN-205ENST00000487496 A0A1W2PR48 441 aa10.64□□□□□ -0.71
SPEN-205ENST00000487496 WASHC1A8K0Z3 465 aa10.64□□□□□ -0.71
SPEN-205ENST00000487496 PPP6CO00743 305 aa10.64□□□□□ -0.71
SPEN-205ENST00000487496 OR2J2O76002 312 aa10.64□□□□□ -0.71
SPEN-205ENST00000487496 SEMA3DO95025 777 aa10.64□□□□□ -0.71
SPEN-205ENST00000487496 CLDN1O95832 211 aa10.64□□□□□ -0.71
SPEN-205ENST00000487496 FAM58BPP0C7Q3 252 aa10.64□□□□□ -0.71
SPEN-205ENST00000487496 COX7A2P14406 83 aa10.64□□□□□ -0.71
SPEN-205ENST00000487496 TSPAN8P19075 237 aa10.64□□□□□ -0.71
SPEN-205ENST00000487496 TLX1P31314 330 aaPredicted RBP10.64□□□□□ -0.71
SPEN-205ENST00000487496 BUD31P41223 144 aaPredicted RBP10.64□□□□□ -0.71
SPEN-205ENST00000487496 STT3AP46977 705 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms