RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 LYARQ9NX58 379 aaKnown RBP12.05□□□□□ -0.48
HDAC6-229ENST00000486665 PCDHGA7Q9Y5G6 932 aa12.05□□□□□ -0.48
HDAC6-229ENST00000486665 OR2W5A6NFC9 320 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 NDUFAB1O14561 156 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 ANKRD28O15084 1053 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 EFSO43281 561 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 AKAP10O43572 662 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 CNOT3O75175 753 aaKnown RBP12.04□□□□□ -0.48
HDAC6-229ENST00000486665 AIFM1O95831 613 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 KLK3P07288 261 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-229ENST00000486665 AGXTP21549 392 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 GPX3P22352 226 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 CPN2P22792 545 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 IL12AP29459 219 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 UCNP55089 124 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 RAB38P57729 211 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 FOXL2P58012 376 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 UFM1P61960 85 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 SKP1P63208 163 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 ZNF763Q0D2J5 394 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 SRSF6Q13247 344 aaKnown RBP12.04□□□□□ -0.48
HDAC6-229ENST00000486665 CLN3Q13286 438 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 GSTA3Q16772 222 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 VWA2Q5GFL6 755 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 GKAP1Q5VSY0 366 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-229ENST00000486665 MLIPQ5VWP3 458 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 METTL21CQ5VZV1 264 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 ZNF517Q6ZMY9 492 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-229ENST00000486665 OVCH1Q7RTY7 1134 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 PARP9Q8IXQ6 854 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 KRTCAP2Q8N6L1 136 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 EFCAB3Q8N7B9 438 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 FAM47BQ8NA70 645 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 WBP1Q96G27 269 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 TEX37Q96LM6 180 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 RBCK1Q9BYM8 510 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 DPH1Q9BZG8 443 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 BRINP2Q9C0B6 783 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 MYNNQ9NPC7 610 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 SAR1AQ9NR31 198 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 IFT80Q9P2H3 777 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-229ENST00000486665 TRPC4Q9UBN4 977 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 CTSFQ9UBX1 484 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 PADI1Q9ULC6 663 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 ARL2BPQ9Y2Y0 163 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 PCDHA9Q9Y5H5 950 aa12.04□□□□□ -0.48
HDAC6-229ENST00000486665 COPG1Q9Y678 874 aaKnown RBP12.04□□□□□ -0.48
HDAC6-229ENST00000486665 GLOD5A6NK44 160 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 C9JVG2 144 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 K7ENP7 123 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 BMP10O95393 424 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 RNH1P13489 461 aaKnown RBP12.03□□□□□ -0.48
HDAC6-229ENST00000486665 IDO1P14902 403 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 XCR1P46094 333 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 EFNA3P52797 238 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 CLDN8P56748 225 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 TNFRSF17Q02223 184 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 KLC1Q07866 573 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 UBAP2LQ14157 1087 aaKnown RBP12.03□□□□□ -0.48
HDAC6-229ENST00000486665 RPS6KA2Q15349 733 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 PDCD4Q53EL6 469 aaKnown RBP12.03□□□□□ -0.48
HDAC6-229ENST00000486665 NDUFAF5Q5TEU4 345 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 ANKRD26P1Q6NSI1 321 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 INO80CQ6PI98 192 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-229ENST00000486665 PAOXQ6QHF9 649 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 MTDHQ86UE4 582 aaKnown RBP12.03□□□□□ -0.48
HDAC6-229ENST00000486665 LAPTM4BQ86VI4 370 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 ZC3H7AQ8IWR0 971 aaKnown RBP12.03□□□□□ -0.48
HDAC6-229ENST00000486665 RIMKLAQ8IXN7 391 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 TMEM132CQ8N3T6 1108 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 CPSF7Q8N684 471 aaKnown RBP12.03□□□□□ -0.48
HDAC6-229ENST00000486665 TBC1D20Q96BZ9 403 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 NMUR2Q9GZQ4 415 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 SDR39U1Q9NRG7 319 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-229ENST00000486665 LANCL2Q9NS86 450 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 PHF11Q9UIL8 331 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 CES1P1Q9UKY3 287 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 TRIM33Q9UPN9 1127 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 WBP11Q9Y2W2 641 aaKnown RBP12.03□□□□□ -0.48
HDAC6-229ENST00000486665 MAP4K5Q9Y4K4 846 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 NAV2Q8IVL1 2488 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 AHCTF1Q8WYP5 2266 aa12.03□□□□□ -0.48
HDAC6-229ENST00000486665 IGLV3-12A0A075B6K2 115 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 VSTM2BA6NLU5 285 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 GABRR3A8MPY1 467 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 B8ZZF3 427 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 FCHO1O14526 889 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 RAD1O60671 282 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 B4GALT2O60909 372 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 GUCY1B2O75343 617 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 CDC123O75794 336 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-229ENST00000486665 FHP07954 510 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 FURINP09958 794 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 CCNYL3P0C7X3 344 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 NR2F6P10588 404 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 PIM1P11309 404 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-229ENST00000486665 ASMTP46597 345 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 ZFP36L2P47974 494 aaKnown RBP12.02□□□□□ -0.49
HDAC6-229ENST00000486665 ALDH9A1P49189 494 aa12.02□□□□□ -0.49
HDAC6-229ENST00000486665 MRPL19P49406 292 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms