RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 SPACA6W5XKT8 324 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 OTOGQ6ZRI0 2925 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 DOCK10Q96BY6 2186 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 A0A1W2PPW3 197 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 TMEM191CA6NGB0 347 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 OR52A4PA6NMU1 304 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 ANKRD66B4E2M5 251 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 C9J4A7 227 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 MYO1CO00159 1063 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 PEX12O00623 359 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 CIB2O75838 187 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 CCNDBP1O95273 360 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 PRLP01236 227 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 CD63P08962 238 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 HBQ1P09105 142 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 BRAFP15056 766 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 CHN1P15882 459 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 AGXTP21549 392 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 S100A1P23297 94 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 CFL1P23528 166 aaKnown RBP6.47□□□□□ -1.37
HDAC3-209ENST00000486618 ABCD3P28288 659 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 GCH1P30793 250 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 RRM2P31350 389 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 PSMB10P40306 273 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 MDH1P40925 334 aaKnown RBP6.47□□□□□ -1.37
HDAC3-209ENST00000486618 MAGEA1P43355 309 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 HK2P52789 917 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 TAS2R40P59535 323 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 DCDC1P59894 354 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 S100A12P80511 92 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 CBX1P83916 185 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 SCN1BQ07699 218 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 LGALS3BPQ08380 585 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 IL24Q13007 206 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 MSLNQ13421 630 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-209ENST00000486618 ATP1A4Q13733 1029 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 USP10Q14694 798 aaKnown RBP6.47□□□□□ -1.37
HDAC3-209ENST00000486618 HERC3Q15034 1050 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 GPR19Q15760 415 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 MOGQ16653 247 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 NHSL2Q5HYW2 709 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 PLEKHS1Q5SXH7 462 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 PLEKHA7Q6IQ23 1121 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 TIGD7Q6NT04 549 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-209ENST00000486618 DEGS2Q6QHC5 323 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 Q6ZS92 163 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 TRMT10CQ7L0Y3 403 aaKnown RBP6.47□□□□□ -1.37
HDAC3-209ENST00000486618 GDF7Q7Z4P5 450 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 POLNQ7Z5Q5 900 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 FJX1Q86VR8 437 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 OOSP2Q86WS3 158 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 CDKL3Q8IVW4 592 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-209ENST00000486618 LRRC34Q8IZ02 419 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 DSELQ8IZU8 1212 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 GALNT16Q8N428 558 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 TRAM1L1Q8N609 369 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 ZBTB2Q8N680 514 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 FAM71BQ8TC56 605 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 DYDC1Q8WWB3 177 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 EXT2Q93063 718 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 GLYATL1Q969I3 302 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 PTERQ96BW5 349 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 ZNF501Q96CX3 271 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-209ENST00000486618 C14orf79Q96F83 325 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 C17orf62Q9BQA9 187 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 ADGRE3Q9BY15 652 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 SLC5A7Q9GZV3 580 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 THAP2Q9H0W7 228 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 COQ10BQ9H8M1 238 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 BRF2Q9HAW0 419 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 C12orf10Q9HB07 376 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 PARVBQ9HBI1 364 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 LZTFL1Q9NQ48 299 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 SAMSN1Q9NSI8 373 aaKnown RBP6.47□□□□□ -1.37
HDAC3-209ENST00000486618 CENPMQ9NSP4 180 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 ETNK2Q9NVF9 386 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 HRASLS2Q9NWW9 162 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 SENP1Q9P0U3 644 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 KLHL14Q9P2G3 628 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 KLHL9Q9P2J3 617 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 COPG2Q9UBF2 871 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 TRIM10Q9UDY6 481 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 TRPS1Q9UHF7 1281 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 ZNF148Q9UQR1 794 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 OSGIN2Q9Y236 505 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 R3HDM2Q9Y2K5 976 aaKnown RBP6.47□□□□□ -1.37
HDAC3-209ENST00000486618 HIVEP1P15822 2718 aa6.47□□□□□ -1.37
HDAC3-209ENST00000486618 SPENQ96T58 3664 aaKnown RBP6.46□□□□□ -1.37
HDAC3-209ENST00000486618 UQCRHLA0A096LP55 91 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 OR5K3A6NET4 321 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 DBX1A6NMT0 343 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 A8MV72 311 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-209ENST00000486618 GOLGA8TH3BQL2 631 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 GOLGA8RI6L899 631 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 MATN3O15232 486 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 ATP8B1O43520 1251 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 GPRIN2O60269 458 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 ZG16O60844 167 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 MTX2O75431 263 aa6.46□□□□□ -1.38
HDAC3-209ENST00000486618 UQCRHP07919 91 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms