RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 TCEA2Q15560 299 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 ALG11Q2TAA5 492 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 SPDYE7PQ495Y7 208 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 B3GNT6Q6ZMB0 384 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 GPR141Q7Z602 305 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 ALDH16A1Q8IZ83 802 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 GEMIN6Q8WXD5 167 aaKnown RBP19.32■□□□□ 0.68
HPS3-206ENST00000486530 TMIGD2Q96BF3 282 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 PRDM7Q9NQW5 492 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 THSD1Q9NS62 852 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 NDUFAF4Q9P032 175 aa19.32■□□□□ 0.68
HPS3-206ENST00000486530 PNMA8BQ9ULN7 279 aaPredicted RBP19.32■□□□□ 0.68
HPS3-206ENST00000486530 H3BSA7 217 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 MITFO75030 526 aaPredicted RBP19.31■□□□□ 0.68
HPS3-206ENST00000486530 ITGA2P17301 1181 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 RRM2P31350 389 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 RYKP34925 604 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 SLC19A1P41440 591 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 CDK9P50750 372 aaKnown RBP19.31■□□□□ 0.68
HPS3-206ENST00000486530 STXBP1P61764 594 aaKnown RBP19.31■□□□□ 0.68
HPS3-206ENST00000486530 MRM1Q6IN84 353 aaKnown RBP19.31■□□□□ 0.68
HPS3-206ENST00000486530 REEP3Q6NUK4 255 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 ZNF773Q6PK81 442 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 PAQR7Q86WK9 346 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 ZNF687Q8N1G0 1237 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 SETD9Q8NE22 299 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 CHDHQ8NE62 594 aaPredicted RBP19.31■□□□□ 0.68
HPS3-206ENST00000486530 NPLQ9BXD5 320 aaPredicted RBP19.31■□□□□ 0.68
HPS3-206ENST00000486530 VCX3AQ9NNX9 186 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 LTB4R2Q9NPC1 389 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 EBF1Q9UH73 591 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 BLOC1S6Q9UL45 172 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 DGKBQ9Y6T7 804 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 C4orf51C9J302 202 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 STATHP02808 62 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 CHRNB1P11230 501 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 ATP5A1P25705 553 aaKnown RBP19.31■□□□□ 0.68
HPS3-206ENST00000486530 NTSP30990 170 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 YAP1P46937 504 aaKnown RBP19.31■□□□□ 0.68
HPS3-206ENST00000486530 RABIFP47224 123 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 RPS15AP62244 130 aaKnown RBP19.31■□□□□ 0.68
HPS3-206ENST00000486530 TFF2Q03403 129 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 SLAMF1Q13291 335 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 TOP3AQ13472 1001 aaPredicted RBP19.31■□□□□ 0.68
HPS3-206ENST00000486530 KEAP1Q14145 624 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 KIR2DS3Q14952 304 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 LEXMQ3ZCV2 418 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 ZBED5Q49AG3 693 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 FAHD1Q6P587 224 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 Q6ZS52 159 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 Q6ZSR6 202 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 C6orf120Q7Z4R8 191 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 GALNT5Q7Z7M9 940 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 ARMC8Q8IUR7 673 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 HORMAD2Q8N7B1 307 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 ACOT4Q8N9L9 421 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 OR8K5Q8NH50 307 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 GUCD1Q96NT3 240 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 RIBC2Q9H4K1 309 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 POLMQ9NP87 494 aaPredicted RBP19.31■□□□□ 0.68
HPS3-206ENST00000486530 SLC35C2Q9NQQ7 365 aa19.31■□□□□ 0.68
HPS3-206ENST00000486530 RSL24D1Q9UHA3 163 aaKnown RBP19.31■□□□□ 0.68
HPS3-206ENST00000486530 C5orf58C9J3I9 102 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 BTN3A3O00478 584 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 MAN2B1O00754 1011 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 ZW10O43264 779 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 IGLV3-19P01714 112 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 CRHBPP24387 322 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 GABARAPL2P60520 117 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 ISL1P61371 349 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 TGM3Q08188 693 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 CD47Q08722 323 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 ILF3Q12906 894 aaKnown RBP eCLIP19.3■□□□□ 0.68
HPS3-206ENST00000486530 TJAP1Q5JTD0 557 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 C6orf141Q5SZD1 244 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 TSEN54Q7Z6J9 526 aaKnown RBP19.3■□□□□ 0.68
HPS3-206ENST00000486530 ABI3BPQ7Z7G0 1075 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 ATG16L2Q8NAA4 619 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 ZFAND2BQ8WV99 257 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 ZNF300Q96RE9 604 aaPredicted RBP19.3■□□□□ 0.68
HPS3-206ENST00000486530 MACROD1Q9BQ69 325 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 TWSG1Q9GZX9 223 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 ADNPQ9H2P0 1102 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 KRT84Q9NSB2 600 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 ASB4Q9Y574 426 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 LYVE1Q9Y5Y7 322 aa19.3■□□□□ 0.68
HPS3-206ENST00000486530 PRAMEF26H0Y7S4 382 aa19.29■□□□□ 0.68
HPS3-206ENST00000486530 IL7RP16871 459 aa19.29■□□□□ 0.68
HPS3-206ENST00000486530 EEF1B2P24534 225 aaKnown RBP19.29■□□□□ 0.68
HPS3-206ENST00000486530 TTKP33981 857 aa19.29■□□□□ 0.68
HPS3-206ENST00000486530 CCT3P49368 545 aaKnown RBP19.29■□□□□ 0.68
HPS3-206ENST00000486530 CCR5P51681 352 aa19.29■□□□□ 0.68
HPS3-206ENST00000486530 RPS26P62854 115 aaKnown RBP19.29■□□□□ 0.68
HPS3-206ENST00000486530 PRRT3Q5FWE3 981 aa19.29■□□□□ 0.68
HPS3-206ENST00000486530 BROXQ5VW32 411 aa19.29■□□□□ 0.68
HPS3-206ENST00000486530 PTCRAQ6ISU1 281 aaPredicted RBP19.29■□□□□ 0.68
HPS3-206ENST00000486530 TNFAIP8L2Q6P589 184 aaPredicted RBP19.29■□□□□ 0.68
HPS3-206ENST00000486530 NRROSQ86YC3 692 aa19.29■□□□□ 0.68
HPS3-206ENST00000486530 FBLIM1Q8WUP2 373 aa19.29■□□□□ 0.68
HPS3-206ENST00000486530 AMDHD1Q96NU7 426 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms