RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CYR61O00622 381 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 NKX2-8O15522 239 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 EDF1O60869 148 aaKnown RBP10.71□□□□□ -0.69
NUP50-216ENST00000486184 DIAPH2O60879 1101 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 AIFM1O95831 613 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 UMODP07911 640 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 IL3P08700 152 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 TROVE2P10155 538 aaKnown RBP eCLIP10.71□□□□□ -0.69
NUP50-216ENST00000486184 ACPPP15309 386 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 LBPP18428 481 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 MAOAP21397 527 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 PIK3R1P27986 724 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 ASMTP46597 345 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 ERVK-8P63133 956 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 RAE1P78406 368 aaKnown RBP10.71□□□□□ -0.69
NUP50-216ENST00000486184 BTG2P78543 158 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 RHAGQ02094 409 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 ACTN3Q08043 901 aaPredicted RBP10.71□□□□□ -0.69
NUP50-216ENST00000486184 ST3GAL2Q16842 350 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 SMU1Q2TAY7 513 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 RFTN2Q52LD8 501 aaPredicted RBP10.71□□□□□ -0.69
NUP50-216ENST00000486184 CRTC2Q53ET0 693 aaPredicted RBP10.71□□□□□ -0.69
NUP50-216ENST00000486184 C6orf136Q5SQH8 315 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 C18orf63Q68DL7 685 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 ACAD11Q709F0 780 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 IKBIPQ70UQ0 350 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 LRRC34Q8IZ02 419 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 C16orf78Q8WTQ4 265 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 THAP4Q8WY91 577 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 ZDHHC16Q969W1 377 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 CPNE5Q9HCH3 593 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 MYNNQ9NPC7 610 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 MIEF1Q9NQG6 463 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 TEX10Q9NXF1 929 aaPredicted RBP10.71□□□□□ -0.69
NUP50-216ENST00000486184 NOP53Q9NZM5 478 aaKnown RBP10.71□□□□□ -0.69
NUP50-216ENST00000486184 GIMAP2Q9UG22 337 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 PSME2Q9UL46 239 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 POLHQ9Y253 713 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 MAN2B2Q9Y2E5 1009 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 DLGAP4Q9Y2H0 992 aa10.71□□□□□ -0.69
NUP50-216ENST00000486184 A0A1W2PR48 441 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 OR2W5A6NFC9 320 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 GLOD5A6NK44 160 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 SRRM3A6NNA2 597 aaPredicted RBP10.7□□□□□ -0.7
NUP50-216ENST00000486184 K7ENP7 123 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 POLR3GO15318 223 aaPredicted RBP10.7□□□□□ -0.7
NUP50-216ENST00000486184 DYRK3O43781 588 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 CTNSO60931 367 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 LDB3O75112 727 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 PRKRAO75569 313 aaKnown RBP10.7□□□□□ -0.7
NUP50-216ENST00000486184 TGDSO95455 350 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 IFNA16P05015 189 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 PRPS2P11908 318 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 COX7A2P14406 83 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 DRD2P14416 443 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 DDX5P17844 614 aaKnown RBP10.7□□□□□ -0.7
NUP50-216ENST00000486184 WT1P19544 449 aaPredicted RBP10.7□□□□□ -0.7
NUP50-216ENST00000486184 EPHA3P29320 983 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 HPCAL1P37235 193 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 HNRNPFP52597 415 aaKnown RBP10.7□□□□□ -0.7
NUP50-216ENST00000486184 RRADP55042 308 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 OR4D2P58180 307 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 EEF1A2Q05639 463 aaKnown RBP10.7□□□□□ -0.7
NUP50-216ENST00000486184 C2orf80Q0P641 193 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 BIKQ13323 160 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 ATP1A4Q13733 1029 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 SERTAD2Q14140 314 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 ATP1A1-AS1Q5TC04 95 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 C6orf163Q5TEZ5 329 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 VWA5B1Q5TIE3 1220 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 IL23RQ5VWK5 629 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 INO80CQ6PI98 192 aaPredicted RBP10.7□□□□□ -0.7
NUP50-216ENST00000486184 MED25Q71SY5 747 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 PPP1R32Q7Z5V6 425 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 MRGPREQ86SM8 312 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 FAM9CQ8IZT9 166 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 LIX1Q8N485 282 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 TMEM52Q8NDY8 209 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 PLPP5Q8NEB5 264 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 TSLPQ969D9 159 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 TM4SF18Q96CE8 201 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 KLHL29Q96CT2 875 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 FER1L6-AS2Q96M78 137 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 CATSPER2Q96P56 530 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 TSSK3Q96PN8 268 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 SIKE1Q9BRV8 207 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 TRIM55Q9BYV6 548 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 CCDC134Q9H6E4 229 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 AKTIPQ9H8T0 292 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 GIMAP4Q9NUV9 329 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 P4HTMQ9NXG6 502 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 WBP11Q9Y2W2 641 aaKnown RBP10.7□□□□□ -0.7
NUP50-216ENST00000486184 PCDHA9Q9Y5H5 950 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 HS3ST3B1Q9Y662 390 aa10.7□□□□□ -0.7
NUP50-216ENST00000486184 ANKRD11Q6UB99 2663 aaPredicted RBP10.69□□□□□ -0.7
NUP50-216ENST00000486184 NSG1A0A0A6YYJ2 146 aa10.69□□□□□ -0.7
NUP50-216ENST00000486184 SDHDO14521 159 aa10.69□□□□□ -0.7
NUP50-216ENST00000486184 ERAL1O75616 437 aaKnown RBP10.69□□□□□ -0.7
NUP50-216ENST00000486184 BCKDHAP12694 445 aa10.69□□□□□ -0.7
NUP50-216ENST00000486184 SDC1P18827 310 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms