RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 IGFL3Q6UXB1 125 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 LINC00696Q6ZRV3 163 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 RPS27LQ71UM5 84 aaKnown RBP8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 FBXW8Q8N3Y1 598 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 POU5F2Q8N7G0 328 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 PPFIBP2Q8ND30 876 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 OR2A1Q8NGT9 310 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 METTL6Q8TCB7 284 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 SKA2Q8WVK7 121 aaPredicted RBP8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 DLG3Q92796 817 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 PPP1R36Q96LQ0 422 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 ZNF285Q96NJ3 590 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 TMEM79Q9BSE2 394 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 BRINP2Q9C0B6 783 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 TUBB1Q9H4B7 451 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 ATP13A2Q9NQ11 1180 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 ZIM2Q9NZV7 527 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 IGKV1-8A0A0C4DH67 115 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 HYKKA2RU49 373 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 VSTM2BA6NLU5 285 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 NPIPB8E9PQR5 432 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 PPP6CO00743 305 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 AIM2O14862 343 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 PEX11AO75192 247 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 CLDN9O95484 217 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 GUCA1CO95843 209 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 ONECUT2O95948 504 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 NPPAP01160 153 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 LINC00032P0C843 101 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 ACPPP15309 386 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 GPX3P22352 226 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 GCKP35557 465 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 DCTP40126 519 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 SLC6A12P48065 614 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 NUDT2P50583 147 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 PNLIPRP1P54315 467 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 MTTPP55157 894 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 FOXA1P55317 472 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 SOX8P57073 446 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 SLC25A3Q00325 362 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 KLC1Q07866 573 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 TBL3Q12788 808 aaKnown RBP8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 AIMP2Q13155 320 aaKnown RBP8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 SYT16Q17RD7 645 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 HKDC1Q2TB90 917 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 MMEL1Q495T6 779 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 AGKQ53H12 422 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 FAAH2Q6GMR7 532 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 LETMD1Q6P1Q0 360 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 UNC5DQ6UXZ4 953 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 BNC2Q6ZN30 1099 aaPredicted RBP8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 TRIM46Q7Z4K8 759 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 PLD3Q8IV08 490 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 DEFB107AQ8IZN7 70 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 ZADH2Q8N4Q0 377 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 CDYL2Q8N8U2 506 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 L3MBTL4Q8NA19 623 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 OR2L3Q8NG85 312 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 OR4F6Q8NGB9 312 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 OR11G2Q8NGC1 345 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 DNAJB14Q8TBM8 379 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 STT3BQ8TCJ2 826 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 METTL2AQ96IZ6 378 aaKnown RBP8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 THOC3Q96J01 351 aaKnown RBP8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 C10orf90Q96M02 699 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 C3orf30Q96M34 536 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 BARD1Q99728 777 aaKnown RBP8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 HOPXQ9BPY8 73 aaPredicted RBP8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 WDR41Q9HAD4 459 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 DNAJC11Q9NVH1 559 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 AIG1Q9NVV5 245 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 ASIC5Q9NY37 505 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 PLA2G3Q9NZ20 509 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 SLC7A8Q9UHI5 535 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 ZNF225Q9UK10 706 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 G3BP2Q9UN86 482 aaKnown RBP8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 SNX6Q9UNH7 406 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 GPR45Q9Y5Y3 372 aa8.87□□□□□ -0.99
TMEM39A-208ENST00000486159 USP9YO00507 2555 aaPredicted RBP8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 FITM1A5D6W6 292 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 OR2W5A6NFC9 320 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 ARHGEF33A8MVX0 844 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 H0YGG7 62 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 ULK1O75385 1050 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 RPN2P04844 631 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 ALDOCP09972 364 aaKnown RBP8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 ZGLP1P0C6A0 271 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 PRPH2P23942 346 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 HSD17B2P37059 387 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 ARL1P40616 181 aaPredicted RBP8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 ARSFP54793 590 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 ARF3P61204 181 aaPredicted RBP8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 EEF1A2Q05639 463 aaKnown RBP8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 TSTA3Q13630 321 aaPredicted RBP8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 GRM7Q14831 915 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 KPNB1Q14974 876 aaKnown RBP8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 C6orf136Q5SQH8 315 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 C1orf146Q5VVC0 180 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 LIPJQ5W064 366 aa8.86□□□□□ -0.99
TMEM39A-208ENST00000486159 B3GNTL1Q67FW5 361 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms