RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 TLX1P31314 330 aaPredicted RBP16.45■□□□□ 0.22
COL6A1-204ENST00000486023 ALDH6A1Q02252 535 aaKnown RBP16.45■□□□□ 0.22
COL6A1-204ENST00000486023 SERTAD2Q14140 314 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 FAM219BQ5XKK7 198 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 ZNF324BQ6AW86 544 aaPredicted RBP16.45■□□□□ 0.22
COL6A1-204ENST00000486023 ADGRD1Q6QNK2 874 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 LGI4Q8N135 537 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 ZNF321PQ8N8H1 164 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 L3MBTL4Q8NA19 623 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 FAM98AQ8NCA5 519 aaKnown RBP16.45■□□□□ 0.22
COL6A1-204ENST00000486023 TRPC4APQ8TEL6 797 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 PTPMT1Q8WUK0 201 aaPredicted RBP16.45■□□□□ 0.22
COL6A1-204ENST00000486023 UBLCP1Q8WVY7 318 aaPredicted RBP16.45■□□□□ 0.22
COL6A1-204ENST00000486023 DAZLQ92904 295 aaKnown RBP16.45■□□□□ 0.22
COL6A1-204ENST00000486023 ANKRD9Q96BM1 317 aaPredicted RBP16.45■□□□□ 0.22
COL6A1-204ENST00000486023 DGAT2Q96PD7 388 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 RPF2Q9H7B2 306 aaKnown RBP16.45■□□□□ 0.22
COL6A1-204ENST00000486023 TMEM216Q9P0N5 145 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 VTI1BQ9UEU0 232 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 PLEKHB1Q9UF11 243 aaPredicted RBP16.45■□□□□ 0.22
COL6A1-204ENST00000486023 ERVK-11Q9UQG0 969 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 ATG4BQ9Y4P1 393 aa16.45■□□□□ 0.22
COL6A1-204ENST00000486023 SMIM23A6NLE4 172 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 NPIPA5E9PKD4 350 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 WWP2O00308 870 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 PPP6CO00743 305 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 FGF17O60258 216 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 OR2J2O76002 312 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 TAC1P20366 129 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 HLCSP50747 726 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 TDGF1P3P51864 188 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 HNRNPH2P55795 449 aaKnown RBP16.44■□□□□ 0.22
COL6A1-204ENST00000486023 IFT88Q13099 833 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 C4orf17Q53FE4 359 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 OR4F6Q8NGB9 312 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 OR14A16Q8NHC5 309 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 WDR20Q8TBZ3 569 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 UCN3Q969E3 161 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 MTBPQ96DY7 904 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 SCMH1Q96GD3 660 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 RBM18Q96H35 190 aaKnown RBP16.44■□□□□ 0.22
COL6A1-204ENST00000486023 ELOVL6Q9H5J4 265 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 ZBTB26Q9HCK0 441 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 MS4A12Q9NXJ0 267 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 PHF11Q9UIL8 331 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 NPIPA1Q9UND3 350 aa16.44■□□□□ 0.22
COL6A1-204ENST00000486023 A8MT66 165 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 FOXO6A8MYZ6 492 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 ZNHIT1O43257 154 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 TMPRSS11DO60235 418 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 SUPT7LO94864 414 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 SCELO95171 688 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 LDLRP01130 860 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 SBK3P0C264 359 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 FAM58BPP0C7Q3 252 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 PYGBP11216 843 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 COX7A2P14406 83 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 COL8A1P27658 744 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 RFC3P40938 356 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 BUD31P41223 144 aaPredicted RBP16.43■□□□□ 0.22
COL6A1-204ENST00000486023 SLCO1A2P46721 670 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 SSR4P51571 173 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 GPR143P51810 404 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 FOLH1Q04609 750 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 TERF2Q15554 542 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 FRG2Q64ET8 278 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 METTL2BQ6P1Q9 378 aaKnown RBP16.43■□□□□ 0.22
COL6A1-204ENST00000486023 IL20RBQ6UXL0 311 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 HSDL2Q6YN16 418 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 TIFABQ6ZNK6 161 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 CYP4Z2PQ8N1L4 340 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 CPSF7Q8N684 471 aaKnown RBP16.43■□□□□ 0.22
COL6A1-204ENST00000486023 MORN4Q8NDC4 146 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 SLC2A12Q8TD20 617 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 TANKQ92844 425 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 FRG2BQ96QU4 278 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 SERPINI1Q99574 410 aa16.43■□□□□ 0.22
COL6A1-204ENST00000486023 FARSBQ9NSD9 589 aaKnown RBP16.43■□□□□ 0.22
COL6A1-204ENST00000486023 PSMC3IPQ9P2W1 217 aaPredicted RBP16.43■□□□□ 0.22
COL6A1-204ENST00000486023 A0A1B0GTL3 188 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 FOXE1O00358 373 aaPredicted RBP16.42■□□□□ 0.22
COL6A1-204ENST00000486023 PROM1O43490 865 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 OR10H2O60403 315 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 KLK1P06870 262 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 BSGP35613 385 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 GPR85P60893 370 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 TNFRSF17Q02223 184 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 RBPJQ06330 500 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 TRAF3Q13114 568 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 CUL3Q13618 768 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 DGAT2L6Q6ZPD8 337 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 ZNF227Q86WZ6 799 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 NUDT13Q86X67 352 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 ZCCHC7Q8N3Z6 543 aaKnown RBP16.42■□□□□ 0.22
COL6A1-204ENST00000486023 TMEM151AQ8N4L1 468 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 ASB15Q8WXK1 588 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 NTMT1Q9BV86 223 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 CNPPD1Q9BV87 410 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 WDR41Q9HAD4 459 aa16.42■□□□□ 0.22
COL6A1-204ENST00000486023 COPS7AQ9UBW8 275 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms