RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 GCNT1Q02742 428 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 NONOQ15233 471 aaKnown RBP eCLIP3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 ZNF239Q16600 458 aaKnown RBP3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 TAF1BQ53T94 588 aaPredicted RBP3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 C11orf63Q6NUN7 778 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 PAQR6Q6TCH4 344 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 ERC1Q8IUD2 1116 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 ITPRIPQ8IWB1 547 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 AMER3Q8N944 861 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 OR1L3Q8NH93 324 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 RSRC1Q96IZ7 334 aaKnown RBP3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 C10orf90Q96M02 699 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 FZD8Q9H461 694 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 LMAN1LQ9HAT1 526 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 RPS10P5Q9NQ39 176 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 SLC7A10Q9NS82 523 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 MRPL15Q9P015 296 aaKnown RBP3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 CRNNQ9UBG3 495 aaPredicted RBP3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 CDH7Q9ULB5 785 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 TMEM5Q9Y2B1 443 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 PRG3Q9Y2Y8 225 aaPredicted RBP3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 MOB4Q9Y3A3 225 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 MRPL11Q9Y3B7 192 aaKnown RBP3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 C2CD3Q4AC94 2353 aa3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 TDRD15B5MCY1 1934 aaKnown RBP3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 HELZP42694 1942 aaKnown RBP3.85□□□□□ -1.79
SMARCC1-207ENST00000485833 FBN2P35556 2912 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 USP9YO00507 2555 aaPredicted RBP3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 MYH9P35579 1960 aaKnown RBP3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 EPHB6O15197 1021 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 CYTH3O43739 400 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 CCNE2O96020 404 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 SMIM18P0DKX4 95 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 EIF2DP41214 584 aaKnown RBP3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 MAGEA9P43362 315 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 CXCL12P48061 93 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 CCR3P51677 355 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 CRYBB1P53674 252 aaPredicted RBP3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 CYCSP99999 105 aaKnown RBP3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 GUCY2DQ02846 1103 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 HSPB3Q12988 150 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 ITGB3BPQ13352 177 aaPredicted RBP3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 SNAPC1Q16533 368 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 UGT3A2Q3SY77 523 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 CBWD6Q4V339 395 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 TCTEX1D4Q5JR98 221 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 CBWD3Q5JTY5 395 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 SLC35D3Q5M8T2 416 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 LCN1P1Q5VSP4 162 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 LYSMD4Q5XG99 296 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 PRSS55Q6UWB4 352 aaPredicted RBP3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 ARHGAP22Q7Z5H3 698 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 GATAD1Q8WUU5 269 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 PIBF1Q8WXW3 757 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 SEPT1Q8WYJ6 367 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 GTF3AQ92664 365 aaKnown RBP3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 SYN2Q92777 582 aaPredicted RBP3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 CENPTQ96BT3 561 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 TMCO6Q96DC7 493 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 OMA1Q96E52 524 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 FAM20AQ96MK3 541 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 SEPHS2Q99611 448 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 GPATCH1Q9BRR8 931 aaKnown RBP3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 LRRC61Q9BV99 259 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 TRPV4Q9HBA0 871 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 SPHK2Q9NRA0 654 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 PANK4Q9NVE7 773 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 GPR34Q9UPC5 381 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 PADI2Q9Y2J8 665 aa3.84□□□□□ -1.79
SMARCC1-207ENST00000485833 ITPR2Q14571 2701 aa3.84□□□□□ -1.8
SMARCC1-207ENST00000485833 PCDH15Q96QU1 1955 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 NBPF19A0A087WUL8 3843 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 CREBBPQ92793 2442 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 A0A0D9SFI3 127 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 A8MV72 311 aaPredicted RBP3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 DDX39AO00148 427 aaKnown RBP3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 SOCS3O14543 225 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 POLR2MP0CAP2 368 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 SLC2A2P11168 524 aaPredicted RBP3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 DARSP14868 501 aaKnown RBP3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 ACADSP16219 412 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 LHCGRP22888 699 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 GATA2P23769 480 aaPredicted RBP3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 CCNE1P24864 410 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 TLX1P31314 330 aaPredicted RBP3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 CSTF2P33240 577 aaKnown RBP eCLIP3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 CCR2P41597 374 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 NLRP11P59045 1033 aaKnown RBP3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 IRX4P78413 519 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 STK4Q13043 487 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 FASTKD3Q14CZ7 662 aaKnown RBP3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 UBE2SQ16763 222 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 HYIQ5T013 277 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 ZSCAN25Q6NSZ9 544 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 VITQ6UXI7 678 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 ZNF589Q86UQ0 364 aaPredicted RBP3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 CCDC60Q8IWA6 550 aaPredicted RBP3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 OR6S1Q8NH40 331 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 MAPK15Q8TD08 544 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms