RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 RAC1P63000 192 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 HERVK_113P63132 956 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 SKP1P63208 163 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 IRF8Q02556 426 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 DUSP2Q05923 314 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 RGS1Q08116 209 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 KLRB1Q12918 225 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 GTF2H2Q13888 395 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 TERF2Q15554 542 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 DEFB134Q4QY38 66 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 TMEM35AQ53FP2 167 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 UNC50Q53HI1 259 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 XKR6Q5GH73 641 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 PAGE2BQ5JRK9 111 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 LGSNQ5TDP6 509 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 VWA5B1Q5TIE3 1220 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 KHDRBS2Q5VWX1 349 aaKnown RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 PLAG1Q6DJT9 500 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 JMJD6Q6NYC1 403 aaPredicted RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 RPUSD3Q6P087 351 aaKnown RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 GTF2H2CQ6P1K8 395 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 LETMD1Q6P1Q0 360 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 KLC3Q6P597 504 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 EMBQ6PCB8 327 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 RNF165Q6ZSG1 346 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 ASB18Q6ZVZ8 466 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 TAOK1Q7L7X3 1001 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 GOLGA7Q7Z5G4 137 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 CPEB2Q7Z5Q1 589 aaKnown RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 ADCK2Q7Z695 626 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 ANKRD37Q7Z713 158 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 ZNF227Q86WZ6 799 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 PTRH1Q86Y79 214 aaKnown RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 ZCCHC7Q8N3Z6 543 aaKnown RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 TBC1D19Q8N5T2 526 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 ZNF321PQ8N8H1 164 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 APCDD1LQ8NCL9 501 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 SRFBP1Q8NEF9 429 aaKnown RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 HUS1BQ8NHY5 278 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 M1APQ8TC57 530 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 ELP5Q8TE02 316 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 HAS2Q92819 552 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 UBE2E3Q969T4 207 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 PNPLA2Q96AD5 504 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 TMEM237Q96Q45 408 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 SERINC2Q96SA4 455 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 SPOCK3Q9BQ16 436 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 TUBB6Q9BUF5 446 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 CRB3Q9BUF7 120 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 ERVK-6Q9BXR3 956 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 ROPN1BQ9BZX4 212 aaPredicted RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 LHPPQ9H008 270 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 DDX31Q9H8H2 851 aaKnown RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 IPPKQ9H8X2 491 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 ROPN1Q9HAT0 212 aaPredicted RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 SRA1Q9HD15 236 aaKnown RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 LYRM4Q9HD34 91 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 NECTIN3Q9NQS3 549 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 ZNF71Q9NQZ8 489 aaPredicted RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 FARSBQ9NSD9 589 aaKnown RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 SIRT5Q9NXA8 310 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 GPR83Q9NYM4 423 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 OPTCQ9UBM4 332 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 DCDC2Q9UHG0 476 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 RNF11Q9Y3C5 154 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 ZNF451Q9Y4E5 1061 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 MMACHCQ9Y4U1 282 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 PCDHGB6Q9Y5F9 930 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 PTGDR2Q9Y5Y4 395 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 FBN2P35556 2912 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 CSMD2Q7Z408 3487 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 HECTD1Q9ULT8 2610 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 A0A0A6YYD5 115 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 IQANK1A0A1B0GTG1 560 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 MYOCOSA0A1B0GUC4 107 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 ARHGAP10A1A4S6 786 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 BLACEA4D250 179 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 SYNDIG1LA6NDD5 238 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 PABPN1LA6NDY0 278 aaKnown RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 ANKDD1BA6NHY2 528 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 TMEM200CA6NKL6 621 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 B4DXG7 233 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 SUPT3HB4E1H0 165 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 LINC01387J3KSC0 135 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 PEX12O00623 359 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 PLPP1O14494 284 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 TMPRSS11DO60235 418 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 CCNT2O60583 730 aaKnown RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 PLIN3O60664 434 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 CTNSO60931 367 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 SH3BGRLO75368 114 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 DEAF1O75398 565 aaPredicted RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 SUPT3HO75486 399 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 CDC123O75794 336 aaPredicted RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 SEMA3DO95025 777 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 CLDN9O95484 217 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 PROCP04070 461 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 C8orf89P0DMQ9 161 aa5.35□□□□□ -1.55
CUX1-208ENST00000485792 RNH1P13489 461 aaKnown RBP5.35□□□□□ -1.55
CUX1-208ENST00000485792 HIST1H1TP22492 207 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms