RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ASF1BQ9NVP2 202 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 ANKRD10Q9NXR5 420 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 MID2Q9UJV3 735 aa11.7□□□□□ -0.54
PTCD1-205ENST00000485746 MED13Q9UHV7 2174 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 MANBAO00462 879 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 OR10H2O60403 315 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 PLIN3O60664 434 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 PRAMEF2O60811 474 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 ULK1O75385 1050 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 EEDO75530 441 aaKnown RBP11.69□□□□□ -0.54
PTCD1-205ENST00000485746 ZFAND5O76080 213 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 SEMA3DO95025 777 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 ETHE1O95571 254 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 PROCP04070 461 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 NUDT17P0C025 328 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 CPA3P15088 417 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 CD46P15529 392 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 GNLYP22749 145 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 BSGP35613 385 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 TNFSF10P50591 281 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 PKNOX1P55347 436 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 HNRNPH2P55795 449 aaKnown RBP11.69□□□□□ -0.54
PTCD1-205ENST00000485746 NAA20P61599 178 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 TNFRSF17Q02223 184 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 LCP2Q13094 533 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 BIKQ13323 160 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 TUBA3CQ13748 450 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 NR6A1Q15406 480 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 TERF2Q15554 542 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 ZNF766Q5HY98 468 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 C18orf63Q68DL7 685 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 TUBA3EQ6PEY2 450 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 NFAM1Q8NET5 270 aaPredicted RBP11.69□□□□□ -0.54
PTCD1-205ENST00000485746 OR14A16Q8NHC5 309 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 RDH11Q8TC12 318 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 CAVIN3Q969G5 261 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 L3HYPDHQ96EM0 354 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 C5orf34Q96MH7 638 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 ZNF382Q96SR6 550 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 OR8D2Q9GZM6 311 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 DDX31Q9H8H2 851 aaKnown RBP11.69□□□□□ -0.54
PTCD1-205ENST00000485746 MID1IP1Q9NPA3 183 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 FARSBQ9NSD9 589 aaKnown RBP11.69□□□□□ -0.54
PTCD1-205ENST00000485746 VTI1BQ9UEU0 232 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 PPT2Q9UMR5 302 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 ATG4BQ9Y4P1 393 aa11.69□□□□□ -0.54
PTCD1-205ENST00000485746 A0A0A6YYD5 115 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 GLOD5A6NK44 160 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 C17orf105B2RV13 164 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 G3V2L1 256 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 TGFBR3LH3BV60 316 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 PROM1O43490 865 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 GUCY1B2O75343 617 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 PRKRAO75569 313 aaKnown RBP11.68□□□□□ -0.54
PTCD1-205ENST00000485746 RASAL1O95294 804 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 TUBBP07437 444 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 NR2F6P10588 404 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 CD96P40200 585 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 MAPK12P53778 367 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 NAGLUP54802 743 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 PLIN5Q00G26 463 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 SLC18A2Q05940 514 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 ASPHQ12797 758 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 OR1C1Q15619 314 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 C6orf163Q5TEZ5 329 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 SRRM1Q8IYB3 904 aaKnown RBP11.68□□□□□ -0.54
PTCD1-205ENST00000485746 TMEM156Q8N614 296 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 BCORP1Q8N888 145 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 MORN4Q8NDC4 146 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 GRHL3Q8TE85 626 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 SREK1Q8WXA9 508 aaKnown RBP11.68□□□□□ -0.54
PTCD1-205ENST00000485746 TMEM125Q96AQ2 219 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 ANKRD9Q96BM1 317 aaPredicted RBP11.68□□□□□ -0.54
PTCD1-205ENST00000485746 PPWD1Q96BP3 646 aaKnown RBP11.68□□□□□ -0.54
PTCD1-205ENST00000485746 SMC6Q96SB8 1091 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 HBEGFQ99075 208 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 MRPL1Q9BYD6 325 aaKnown RBP11.68□□□□□ -0.54
PTCD1-205ENST00000485746 C12orf65Q9H3J6 166 aaKnown RBP11.68□□□□□ -0.54
PTCD1-205ENST00000485746 BRF2Q9HAW0 419 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 KLHL1Q9NR64 748 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 VPS29Q9UBQ0 182 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 COPS7AQ9UBW8 275 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 EMCNQ9ULC0 261 aa11.68□□□□□ -0.54
PTCD1-205ENST00000485746 A0A1B0GTL3 188 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 A0A1W2PR48 441 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 TCP11X1B4DZS4 312 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 TMPRSS11DO60235 418 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 FGF17O60258 216 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 MAN1A2O60476 641 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 ESRRBO95718 433 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 CRYABP02511 175 aaKnown RBP11.67□□□□□ -0.54
PTCD1-205ENST00000485746 ENO1P06733 434 aaKnown RBP11.67□□□□□ -0.54
PTCD1-205ENST00000485746 HSD3B1P14060 373 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 ALOX15P16050 662 aaPredicted RBP11.67□□□□□ -0.54
PTCD1-205ENST00000485746 HSD3B2P26439 372 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 PIK3R1P27986 724 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 TPP2P29144 1249 aaPredicted RBP11.67□□□□□ -0.54
PTCD1-205ENST00000485746 DEKP35659 375 aaKnown RBP11.67□□□□□ -0.54
PTCD1-205ENST00000485746 UQCRFS1P47985 274 aa11.67□□□□□ -0.54
PTCD1-205ENST00000485746 CYB561P49447 251 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms