RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 MAP2K2P36507 400 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 FEN1P39748 380 aaKnown RBP3.54□□□□□ -1.84
FN1-222ENST00000485567 PAX9P55771 341 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 XGP55808 180 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 SRP54P61011 504 aaKnown RBP3.54□□□□□ -1.84
FN1-222ENST00000485567 ACTR1AP61163 376 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 GNB1P62873 340 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 TRA2BP62995 288 aaKnown RBP3.54□□□□□ -1.84
FN1-222ENST00000485567 GUCY2DQ02846 1103 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 MSLNQ13421 630 aaPredicted RBP3.54□□□□□ -1.84
FN1-222ENST00000485567 DRP2Q13474 957 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 CUL2Q13617 745 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 MEF2DQ14814 521 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 PPP1R7Q15435 360 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 INAQ16352 499 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 CCDC40Q4G0X9 1142 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 FFAR4Q5NUL3 377 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 PRAMEF7Q5VXH5 474 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 ARHGAP17Q68EM7 881 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 SLC25A24Q6NUK1 477 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 RBM43Q6ZSC3 357 aaKnown RBP3.54□□□□□ -1.84
FN1-222ENST00000485567 PTAR1Q7Z6K3 402 aaPredicted RBP3.54□□□□□ -1.84
FN1-222ENST00000485567 TAF8Q7Z7C8 310 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 C17orf64Q86WR6 236 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 SLC22A15Q8IZD6 547 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 SLC43A2Q8N370 569 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 RAB42Q8N4Z0 105 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 DRAXINQ8NBI3 349 aaPredicted RBP3.54□□□□□ -1.84
FN1-222ENST00000485567 MNS1Q8NEH6 495 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 OR6C4Q8NGE1 309 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 OR6S1Q8NH40 331 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 C8orf46Q8TAG6 207 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 GLYATL1Q969I3 302 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 MAGED4Q96JG8 741 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 NSMCE2Q96MF7 247 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 GPR137Q96N19 417 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 PAPOLGQ9BWT3 736 aaKnown RBP3.54□□□□□ -1.84
FN1-222ENST00000485567 SLC7A5P2Q9GIP4 190 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 HOXD1Q9GZZ0 328 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 DPEP3Q9H4B8 488 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 FNDC4Q9H6D8 234 aaPredicted RBP3.54□□□□□ -1.84
FN1-222ENST00000485567 MTHFD2LQ9H903 347 aaPredicted RBP3.54□□□□□ -1.84
FN1-222ENST00000485567 GPN1Q9HCN4 374 aaPredicted RBP3.54□□□□□ -1.84
FN1-222ENST00000485567 SDF2L1Q9HCN8 221 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 ZNF319Q9P2F9 582 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 SPASTQ9UBP0 616 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 CLIP2Q9UDT6 1046 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 ZNF580Q9UK33 172 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 TMED5Q9Y3A6 229 aa3.54□□□□□ -1.84
FN1-222ENST00000485567 NSD2O96028 1365 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 KDRP35968 1356 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 SRRM4A7MD48 611 aaKnown RBP3.53□□□□□ -1.84
FN1-222ENST00000485567 ERVV-2B6SEH9 535 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 GPR89AB7ZAQ6 455 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 TCP10L2B9ZVM9 353 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 HHLA1C9JL84 531 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 LMO7DNF2Z398 122 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 M0QX08 132 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 RASGRF2O14827 1237 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 OGTO15294 1046 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 ZNF432O94892 652 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 TRIM16O95361 564 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 PAHP00439 452 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 APRTP07741 180 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 GPR89BP0CG08 455 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 GHRP10912 638 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 B4GALT1P15291 398 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 EDNRAP25101 427 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 RPA1P27694 616 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 GDI1P31150 447 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 KCNK10P57789 538 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 SPANXN4Q5MJ08 99 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 C12orf60Q5U649 245 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 LYPLAL1Q5VWZ2 237 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 TMEM64Q6YI46 380 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 Q6ZVQ6 151 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 UNC5CLQ8IV45 518 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 DDHD1Q8NEL9 900 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 CCDC148Q8NFR7 591 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 FAM76AQ8TAV0 307 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 U2AF1L4Q8WU68 220 aaKnown RBP3.53□□□□□ -1.84
FN1-222ENST00000485567 SMAP2Q8WU79 429 aaPredicted RBP3.53□□□□□ -1.84
FN1-222ENST00000485567 SMPDL3AQ92484 453 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 TUBGCP3Q96CW5 907 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 ZNF501Q96CX3 271 aaPredicted RBP3.53□□□□□ -1.84
FN1-222ENST00000485567 MRPL38Q96DV4 380 aaKnown RBP3.53□□□□□ -1.84
FN1-222ENST00000485567 C14orf79Q96F83 325 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 GMPPAQ96IJ6 420 aaPredicted RBP3.53□□□□□ -1.84
FN1-222ENST00000485567 COG3Q96JB2 828 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 RBM14Q96PK6 669 aaKnown RBP3.53□□□□□ -1.84
FN1-222ENST00000485567 KCNK16Q96T55 309 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 ATG10Q9H0Y0 220 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 ZNF665Q9H7R5 613 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 DCLRE1BQ9H816 532 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 CRLF2Q9HC73 371 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 TM9SF3Q9HD45 589 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 HOMER3Q9NSC5 361 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 SLC35D1Q9NTN3 355 aa3.53□□□□□ -1.84
FN1-222ENST00000485567 DDX28Q9NUL7 540 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms