RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 C6orf10Q5SRN2 563 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 LRIF1Q5T3J3 769 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 TLDC1Q6P9B6 456 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 MSANTD1Q6ZTZ1 278 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 R3HCC1LQ7Z5L2 792 aaKnown RBP13.71□□□□□ -0.21
LRIF1-202ENST00000485275 GPR135Q8IZ08 494 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 C10orf111Q8N326 155 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 SUN3Q8TAQ9 357 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 DNAJB14Q8TBM8 379 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 ROPN1LQ96C74 230 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 MMABQ96EY8 250 aaPredicted RBP13.71□□□□□ -0.21
LRIF1-202ENST00000485275 AURKBQ96GD4 344 aaPredicted RBP13.71□□□□□ -0.21
LRIF1-202ENST00000485275 CCDC115Q96NT0 180 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 FANCEQ9HB96 536 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 TAS2R7Q9NYW3 318 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 EHD3Q9NZN3 535 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 PHF11Q9UIL8 331 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 SERTAD3Q9UJW9 196 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 UTS2RQ9UKP6 389 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 PCDHGA1Q9Y5H4 931 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 DCHS1Q96JQ0 3298 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 NUP210LQ5VU65 1888 aa13.71□□□□□ -0.21
LRIF1-202ENST00000485275 SPAARA0A1B0GVQ0 90 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 TGFBR3LH3BV60 316 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 RNASET2O00584 256 aaKnown RBP13.71□□□□□ -0.22
LRIF1-202ENST00000485275 DKK1O94907 266 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 C6orf47O95873 294 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 C8orf89P0DMQ9 161 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 ITIH1P19827 911 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 SLC6A2P23975 617 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 CSTF2P33240 577 aaKnown RBP eCLIP13.71□□□□□ -0.22
LRIF1-202ENST00000485275 RPL3P39023 403 aaKnown RBP13.71□□□□□ -0.22
LRIF1-202ENST00000485275 RASSF2P50749 326 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 EFNA3P52797 238 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 LIMK1P53667 647 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 RAB38P57729 211 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 PSME3P61289 254 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 HBA1P69905 142 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 RABL3Q5HYI8 236 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 C1orf189Q5VU69 101 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 TMEM151BQ8IW70 566 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 CLEC4FQ8N1N0 589 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 PCYOX1LQ8NBM8 494 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 AGBL5Q8NDL9 886 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 ZNF681Q96N22 645 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 FAIM2Q9BWQ8 316 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 NPLQ9BXD5 320 aaPredicted RBP13.71□□□□□ -0.22
LRIF1-202ENST00000485275 MAPRE3Q9UPY8 281 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 PCDHB14Q9Y5E9 798 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 CLDN16Q9Y5I7 305 aa13.71□□□□□ -0.22
LRIF1-202ENST00000485275 FAM186AA6NE01 2351 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 A0A096LPI6 279 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 PRSS51A0A1B0GVH4 220 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 OR2W5A6NFC9 320 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 H0YIG0 161 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 NME4O00746 187 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 TM4SF5O14894 197 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 DSCR3O14972 297 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 FOXD2O60548 495 aaPredicted RBP13.7□□□□□ -0.22
LRIF1-202ENST00000485275 JRKO75564 520 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 PDE5AO76074 875 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 ALAS2P22557 587 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 ETV5P41161 510 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 BUD31P41223 144 aaPredicted RBP13.7□□□□□ -0.22
LRIF1-202ENST00000485275 ERV3-1Q14264 604 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 CEBPEQ15744 281 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 ISXQ2M1V0 245 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 DNAL1Q4LDG9 190 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 ZNF551Q7Z340 670 aaPredicted RBP13.7□□□□□ -0.22
LRIF1-202ENST00000485275 OR4N5Q8IXE1 308 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 RNF148Q8N7C7 305 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 PEX11GQ96HA9 241 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 ITCHQ96J02 903 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 PRPF18Q99633 342 aaKnown RBP13.7□□□□□ -0.22
LRIF1-202ENST00000485275 CGREF1Q99674 301 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 NDC1Q9BTX1 674 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 THTPAQ9BU02 230 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 TMEM121BQ9BXQ6 578 aaPredicted RBP13.7□□□□□ -0.22
LRIF1-202ENST00000485275 RPF2Q9H7B2 306 aaKnown RBP13.7□□□□□ -0.22
LRIF1-202ENST00000485275 SLC35C2Q9NQQ7 365 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 SLC22A11Q9NSA0 550 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 ATAD3AQ9NVI7 634 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 CMTM6Q9NX76 183 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 BTNL2Q9UIR0 455 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 CROTQ9UKG9 612 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 RARRES3Q9UL19 164 aa13.7□□□□□ -0.22
LRIF1-202ENST00000485275 A0A1B0GX78 115 aa13.69□□□□□ -0.22
LRIF1-202ENST00000485275 RFXANKO14593 260 aa13.69□□□□□ -0.22
LRIF1-202ENST00000485275 PDPK1O15530 556 aa13.69□□□□□ -0.22
LRIF1-202ENST00000485275 FGF17O60258 216 aa13.69□□□□□ -0.22
LRIF1-202ENST00000485275 LDB3O75112 727 aa13.69□□□□□ -0.22
LRIF1-202ENST00000485275 GUCY1B2O75343 617 aa13.69□□□□□ -0.22
LRIF1-202ENST00000485275 ERAL1O75616 437 aaKnown RBP13.69□□□□□ -0.22
LRIF1-202ENST00000485275 SCRG1O75711 98 aa13.69□□□□□ -0.22
LRIF1-202ENST00000485275 CDC123O75794 336 aaPredicted RBP13.69□□□□□ -0.22
LRIF1-202ENST00000485275 KCNH1O95259 989 aa13.69□□□□□ -0.22
LRIF1-202ENST00000485275 CPSF4O95639 269 aaKnown RBP13.69□□□□□ -0.22
LRIF1-202ENST00000485275 FGF5P12034 268 aa13.69□□□□□ -0.22
LRIF1-202ENST00000485275 ZNF28P17035 718 aa13.69□□□□□ -0.22
LRIF1-202ENST00000485275 SOX18P35713 384 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms