RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 STK38LQ9Y2H1 464 aa15.18■□□□□ 0.02
DDR1-246ENST00000485023 TRBV11-1A0A0K0K1C0 115 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 WASHC1A8K0Z3 465 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 FGF17O60258 216 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 CRCPO75575 148 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 AIFM1O95831 613 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 WDPCPO95876 746 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 FAM58BPP0C7Q3 252 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 NR2F6P10588 404 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 CHN1P15882 459 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 TNNI3P19429 210 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 BUD31P41223 144 aaPredicted RBP15.17■□□□□ 0.02
DDR1-246ENST00000485023 FOXA1P55317 472 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 TAS2R50P59544 299 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 C10orf62Q5T681 223 aaPredicted RBP15.17■□□□□ 0.02
DDR1-246ENST00000485023 FRMD7Q6ZUT3 714 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 CISD2Q8N5K1 135 aaKnown RBP15.17■□□□□ 0.02
DDR1-246ENST00000485023 NFAM1Q8NET5 270 aaPredicted RBP15.17■□□□□ 0.02
DDR1-246ENST00000485023 DOK4Q8TEW6 326 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 THAP3Q8WTV1 239 aaPredicted RBP15.17■□□□□ 0.02
DDR1-246ENST00000485023 UCN3Q969E3 161 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 LMF1Q96S06 567 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 NPAS2Q99743 824 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 MECRQ9BV79 373 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 SLC29A3Q9BZD2 475 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.17■□□□□ 0.024e-8■■■□□ 16
DDR1-246ENST00000485023 DDX31Q9H8H2 851 aaKnown RBP15.17■□□□□ 0.02
DDR1-246ENST00000485023 ADAP2Q9NPF8 381 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 MKS1Q9NXB0 559 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 TEX10Q9NXF1 929 aaPredicted RBP15.17■□□□□ 0.02
DDR1-246ENST00000485023 PSD3Q9NYI0 1048 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 STMN3Q9NZ72 180 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 TEKT2Q9UIF3 430 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 MID2Q9UJV3 735 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 PLLPQ9Y342 182 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 ASB4Q9Y574 426 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 MAST4O15021 2626 aa15.17■□□□□ 0.02
DDR1-246ENST00000485023 A0A1W2PR48 441 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 RGS16O15492 202 aaPredicted RBP15.16■□□□□ 0.02
DDR1-246ENST00000485023 ESRRBO95718 433 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 ENO1P06733 434 aaKnown RBP15.16■□□□□ 0.02
DDR1-246ENST00000485023 TPP2P29144 1249 aaPredicted RBP15.16■□□□□ 0.02
DDR1-246ENST00000485023 TLX1P31314 330 aaPredicted RBP15.16■□□□□ 0.02
DDR1-246ENST00000485023 ARFIP1P53367 373 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 PKNOX1P55347 436 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 DNAJB13P59910 316 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 FOLH1Q04609 750 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 ZNF169Q14929 603 aaPredicted RBP15.16■□□□□ 0.02
DDR1-246ENST00000485023 ELAVL1Q15717 326 aaKnown RBP15.16■□□□□ 0.02
DDR1-246ENST00000485023 INPP5JQ15735 1006 aaPredicted RBP15.16■□□□□ 0.02
DDR1-246ENST00000485023 ACER2Q5QJU3 275 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 CEP85LQ5SZL2 805 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 CCNYL2Q5T2Q4 361 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 LIPMQ5VYY2 423 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 MRM1Q6IN84 353 aaKnown RBP15.16■□□□□ 0.02
DDR1-246ENST00000485023 COMMD6Q7Z4G1 85 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 IQCKQ8N0W5 287 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 METTL4Q8N3J2 472 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 SLC5A8Q8N695 610 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 C1orf52Q8N6N3 182 aaKnown RBP15.16■□□□□ 0.02
DDR1-246ENST00000485023 B3GNT7Q8NFL0 401 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 MYRIPQ8NFW9 859 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 OR1N1Q8NGS0 311 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 TCP10LQ8TDR4 215 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 ELP5Q8TE02 316 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 NCLNQ969V3 563 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 ANKRD9Q96BM1 317 aaPredicted RBP15.16■□□□□ 0.02
DDR1-246ENST00000485023 PPWD1Q96BP3 646 aaKnown RBP15.16■□□□□ 0.02
DDR1-246ENST00000485023 C19orf60Q96EN9 201 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 ZNF354BQ96LW1 612 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 ZIM3Q96PE6 472 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 TMEM109Q9BVC6 243 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 CDCP1Q9H5V8 836 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 MS4A12Q9NXJ0 267 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 AHSPQ9NZD4 102 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 PPT2Q9UMR5 302 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 FIS1Q9Y3D6 152 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 CLCA3PQ9Y6N3 262 aa15.16■□□□□ 0.02
DDR1-246ENST00000485023 NAV2Q8IVL1 2488 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 C17orf105B2RV13 164 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 PROM1O43490 865 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 ULK1O75385 1050 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 WISP1O95388 367 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 TUBBP07437 444 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 SERPINB3P29508 390 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 ALDH3A1P30838 453 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 MAPK12P53778 367 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 FOXK1P85037 733 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 HMGCS1Q01581 520 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 GALNT1Q10472 559 aaPredicted RBP15.15■□□□□ 0.02
DDR1-246ENST00000485023 TBL3Q12788 808 aaKnown RBP15.15■□□□□ 0.02
DDR1-246ENST00000485023 TLR1Q15399 786 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 MEP1AQ16819 746 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 PAGE2Q7Z2X7 111 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 ZNF321PQ8N8H1 164 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 MIB2Q96AX9 1013 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 DGAT2Q96PD7 388 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 DEFB126Q9BYW3 111 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 ACPTQ9BZG2 426 aa15.15■□□□□ 0.02
DDR1-246ENST00000485023 OR8D2Q9GZM6 311 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms