RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, human

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP200-206	ENST00000484372	ACSS3	Q9H6R3	686 aa		11.12	□□□□□ -0.63
SNRNP200-206	ENST00000484372	PRDM7	Q9NQW5	492 aa		11.12	□□□□□ -0.63
SNRNP200-206	ENST00000484372	COQ3	Q9NZJ6	369 aa		11.12	□□□□□ -0.63
SNRNP200-206	ENST00000484372	MYOT	Q9UBF9	498 aa		11.12	□□□□□ -0.63
SNRNP200-206	ENST00000484372	CELSR2	Q9HCU4	2923 aa		11.12	□□□□□ -0.63
SNRNP200-206	ENST00000484372	PCNX1	Q96RV3	2341 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372		A0A087WUV0	522 aa	Predicted RBP	11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	C17orf105	B2RV13	164 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	CDC40	O60508	579 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	TGFB1	P01137	390 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	TPO	P07202	933 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	SLC35E2B	P0CK96	405 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	GFAP	P14136	432 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	CD22	P20273	847 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	HIST1H1T	P22492	207 aa	Predicted RBP	11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	ATP5A1	P25705	553 aa	Known RBP	11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	GPR143	P51810	404 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	HNRNPF	P52597	415 aa	Known RBP	11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	ADORA2A-AS1	P86434	159 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	PLGLB1	Q02325	96 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	SLC29A2	Q14542	456 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	KHDRBS2	Q5VWX1	349 aa	Known RBP	11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	TMEM211	Q6ICI0	200 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	ARHGAP11A	Q6P4F7	1023 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	RGS9BP	Q6ZS82	235 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	CMC1	Q7Z7K0	106 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	ZNF227	Q86WZ6	799 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	DOLPP1	Q86YN1	238 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	LAS2	Q8IYD9	372 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	ZFP62	Q8NB50	900 aa	Predicted RBP	11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	PSD4	Q8NDX1	1056 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	TMEM52	Q8NDY8	209 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	OR8K3	Q8NH51	312 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	C16orf52	Q8NHV5	167 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	RHEBL1	Q8TAI7	183 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	ZNF473	Q8WTR7	871 aa	Known RBP	11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	UBTD2	Q8WUN7	234 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	RGMA	Q96B86	450 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	MTFMT	Q96DP5	389 aa	Known RBP	11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	RBM18	Q96H35	190 aa	Known RBP	11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	ART5	Q96L15	291 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	CSF3R	Q99062	836 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	KCMF1	Q9P0J7	381 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372	PCDHGA11	Q9Y5H2	935 aa		11.11	□□□□□ -0.63
SNRNP200-206	ENST00000484372		A0A1B0GTH9	108 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	UBXN8	O00124	270 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	HS6ST1	O60243	411 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	PRAMEF4	O60810	478 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	LDB3	O75112	727 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	FAM155B	O75949	473 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	OR2J2	O76002	312 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	WISP2	O76076	250 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	TBX6	O95947	436 aa	Predicted RBP	11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	GRN	P28799	593 aa	Known RBP	11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	BUD31	P41223	144 aa	Predicted RBP	11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	PIK3CB	P42338	1070 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	PIK3CG	P48736	1102 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	ARFIP1	P53367	373 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	GPR85	P60893	370 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	HSF1	Q00613	529 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	PCDH1	Q08174	1060 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	GTF3C1	Q12789	2109 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	DDX39B	Q13838	428 aa	Known RBP	11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	E2F2	Q14209	437 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	ACAP2	Q15057	778 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	UAP1	Q16222	522 aa	Predicted RBP	11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	RNFT1	Q5M7Z0	435 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	DEPDC1	Q5TB30	811 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	MROH9	Q5TGP6	573 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	PRAMEF9	Q5VWM5	478 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	LIPJ	Q5W064	366 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	OR4C11	Q6IEV9	310 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	ADNP2	Q6IQ32	1131 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	GRHL2	Q6ISB3	625 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	OPN5	Q6U736	354 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	IL20RB	Q6UXL0	311 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	RTL4	Q6ZR62	310 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	GK5	Q6ZS86	529 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	MDGA2	Q7Z553	956 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	MREG	Q8N565	214 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	TEX9	Q8N6V9	391 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	OR7G3	Q8NG95	312 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	FAM57A	Q8TBR7	257 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	CA5BP1	Q8WTZ4	195 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	TANK	Q92844	425 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	NXNL1	Q96CM4	212 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	SGCZ	Q96LD1	299 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	DGAT2	Q96PD7	388 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	PHF12	Q96QT6	1004 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	RASL10B	Q96S79	203 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	ATOH8	Q96SQ7	321 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	MAPKAP1	Q9BPZ7	522 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	ACTR8	Q9H981	624 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.1	□□□□□ -0.63	4e-7	■□□□□ 10.2
SNRNP200-206	ENST00000484372	PHF11	Q9UIL8	331 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	ZNF223	Q9UK11	482 aa	Predicted RBP	11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	PPT2	Q9UMR5	302 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	CLDN16	Q9Y5I7	305 aa		11.1	□□□□□ -0.63
SNRNP200-206	ENST00000484372	TNPO3	Q9Y5L0	923 aa	Known RBP	11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms