RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 ITPAQ9BY32 194 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 POLR1EQ9GZS1 481 aaKnown RBP4.59□□□□□ -1.67
SSBP1-211ENST00000484178 RAB6CQ9H0N0 254 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 SLC25A32Q9H2D1 315 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 DPEP3Q9H4B8 488 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 NXF3Q9H4D5 531 aaKnown RBP4.59□□□□□ -1.67
SSBP1-211ENST00000484178 TM9SF3Q9HD45 589 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 MID1IP1Q9NPA3 183 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 SLC52A3Q9NQ40 469 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 TRPV5Q9NQA5 729 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 FSCN3Q9NQT6 498 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 TMEM248Q9NWD8 314 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 ZSCAN32Q9NX65 697 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 CMTM6Q9NX76 183 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 SELENONQ9NZV5 590 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 TBC1D14Q9P2M4 693 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 PLXNA1Q9UIW2 1896 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 KCND3Q9UK17 655 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 BAG5Q9UL15 447 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 SAMD4AQ9UPU9 718 aaKnown RBP4.59□□□□□ -1.67
SSBP1-211ENST00000484178 EIF3LQ9Y262 564 aaKnown RBP4.59□□□□□ -1.67
SSBP1-211ENST00000484178 BTRCQ9Y297 605 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 FAM32AQ9Y421 112 aaKnown RBP4.59□□□□□ -1.67
SSBP1-211ENST00000484178 DNAJC15Q9Y5T4 150 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 CPQQ9Y646 472 aa4.59□□□□□ -1.67
SSBP1-211ENST00000484178 KIAA1217Q5T5P2 1943 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 LRRC37A2A6NM11 1700 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 IGLV3-10A0A075B6K4 115 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 CXorf51AA0A1B0GTR3 108 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 A0A1W2PPW3 197 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 HTR3EA5X5Y0 456 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 C2orf81A6NN90 581 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 YJEFN3A6XGL0 299 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 A8MVJ9 347 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 FAM220BPB1ANY3 271 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 CENPBD1B2RD01 187 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 E9PLN8 166 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 H7C0S8 307 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 GTPBP1O00178 669 aaKnown RBP4.58□□□□□ -1.68
SSBP1-211ENST00000484178 DFFAO00273 331 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 GNGT2O14610 69 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 PRMT5O14744 637 aaPredicted RBP4.58□□□□□ -1.68
SSBP1-211ENST00000484178 SUPT3HO75486 399 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 PIAS2O75928 621 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 CNTN5O94779 1100 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 APOA1P02647 267 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 CHRNA1P02708 482 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 CLEC3BP05452 202 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 MMP3P08254 477 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 HMBSP08397 361 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 SERPINF2P08697 491 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 ALDOCP09972 364 aaKnown RBP4.58□□□□□ -1.68
SSBP1-211ENST00000484178 TRAPPC2P0DI81 140 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 TRAPPC2BP0DI82 140 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 LAMP2P13473 410 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 NCF1P14598 390 aaPredicted RBP4.58□□□□□ -1.68
SSBP1-211ENST00000484178 PPIBP23284 216 aaKnown RBP4.58□□□□□ -1.68
SSBP1-211ENST00000484178 LMO2P25791 158 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 AVPR1AP37288 418 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 MAGEA11P43364 429 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 NRIP1P48552 1158 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 STC1P52823 247 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 PPP5CP53041 499 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 CDH13P55290 713 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 MAP3K7CLP57077 242 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 PPP2R2BQ00005 443 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 BNC1Q01954 994 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 ITGA7Q13683 1181 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 VGLL4Q14135 290 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 SELPLGQ14242 412 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 VPS26BQ4G0F5 336 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 MARCH8Q5T0T0 291 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 SYT6Q5T7P8 510 aaPredicted RBP4.58□□□□□ -1.68
SSBP1-211ENST00000484178 CACHD1Q5VU97 1274 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 FCRLBQ6BAA4 426 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 GLYATQ6IB77 296 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 DGAT2L7PQ6IED9 249 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 NANOGP8Q6NSW7 305 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 DUS1LQ6P1R4 473 aaKnown RBP4.58□□□□□ -1.68
SSBP1-211ENST00000484178 ZNF549Q6P9A3 640 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 SHQ1Q6PI26 577 aaKnown RBP4.58□□□□□ -1.68
SSBP1-211ENST00000484178 INO80CQ6PI98 192 aaPredicted RBP4.58□□□□□ -1.68
SSBP1-211ENST00000484178 PLEKHG7Q6ZR37 379 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 FAM92BQ6ZTR7 304 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 PAQR9Q6ZVX9 377 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 GET4Q7L5D6 327 aaPredicted RBP4.58□□□□□ -1.68
SSBP1-211ENST00000484178 PXKQ7Z7A4 578 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 TAC4Q86UU9 113 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 DENND6AQ8IWF6 608 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 ARHGAP12Q8IWW6 846 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 FBXO16Q8IX29 292 aaPredicted RBP4.58□□□□□ -1.68
SSBP1-211ENST00000484178 SPARTQ8N0X7 666 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 ABHD11Q8NFV4 315 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 KBTBD8Q8NFY9 601 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 OR2T12Q8NG77 320 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 OR4L1Q8NH43 312 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 C9orf43Q8TAL5 461 aaPredicted RBP4.58□□□□□ -1.68
SSBP1-211ENST00000484178 SETD6Q8TBK2 473 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 KCNJ9Q92806 393 aa4.58□□□□□ -1.68
SSBP1-211ENST00000484178 NCLNQ969V3 563 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms