RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 MS4A12Q9NXJ0 267 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 EPHA6Q9UF33 1036 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 PSME2Q9UL46 239 aa24.85■■□□□ 1.57
SHOX2-204ENST00000483851 DLGAP1O14490 977 aa24.84■■□□□ 1.57
SHOX2-204ENST00000483851 P2RX6O15547 441 aa24.84■■□□□ 1.57
SHOX2-204ENST00000483851 NTSP30990 170 aa24.84■■□□□ 1.57
SHOX2-204ENST00000483851 CHI3L1P36222 383 aaPredicted RBP24.84■■□□□ 1.57
SHOX2-204ENST00000483851 ARRB1P49407 418 aaPredicted RBP24.84■■□□□ 1.57
SHOX2-204ENST00000483851 C6orf132Q5T0Z8 1188 aa24.84■■□□□ 1.57
SHOX2-204ENST00000483851 FRMPD2BQ6IN97 320 aa24.84■■□□□ 1.57
SHOX2-204ENST00000483851 SLC48A1Q6P1K1 146 aa24.84■■□□□ 1.57
SHOX2-204ENST00000483851 ZNF438Q7Z4V0 828 aa24.84■■□□□ 1.57
SHOX2-204ENST00000483851 SPRED1Q7Z699 444 aa24.84■■□□□ 1.57
SHOX2-204ENST00000483851 C19orf47Q8N9M1 422 aaKnown RBP24.84■■□□□ 1.57
SHOX2-204ENST00000483851 C11orf65Q8NCR3 313 aa24.84■■□□□ 1.57
SHOX2-204ENST00000483851 CHID1Q9BWS9 393 aa24.84■■□□□ 1.57
SHOX2-204ENST00000483851 CHRNA10Q9GZZ6 450 aa24.84■■□□□ 1.57
SHOX2-204ENST00000483851 LOC105369274A0A096LPK9 316 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 LOC102723532A0A0G2JNH3 316 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 TNFRSF21O75509 655 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 AIFM1O95831 613 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 NTRK1P04629 796 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 ALOX12P18054 663 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 PCGF2P35227 344 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 MAGEA8P43361 318 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 APOFQ13790 326 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 ATP6AP1Q15904 470 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 TMEM214Q6NUQ4 689 aaKnown RBP24.83■■□□□ 1.57
SHOX2-204ENST00000483851 OR4N4Q8N0Y3 316 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 PNPT1Q8TCS8 783 aaKnown RBP24.83■■□□□ 1.57
SHOX2-204ENST00000483851 NEURL3Q96EH8 262 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 TCTN2Q96GX1 697 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 RNF145Q96MT1 663 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 ELF4Q99607 663 aaPredicted RBP24.83■■□□□ 1.57
SHOX2-204ENST00000483851 SEPHS2Q99611 448 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 KLHL25Q9H0H3 589 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 CXorf36Q9H7Y0 433 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 GPATCH2Q9NW75 528 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 UCKL1Q9NWZ5 548 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 RPS6KA6Q9UK32 745 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 FBXW2Q9UKT8 454 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 CES1P1Q9UKY3 287 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 PADI4Q9UM07 663 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 FAF1Q9UNN5 650 aaPredicted RBP24.83■■□□□ 1.57
SHOX2-204ENST00000483851 SLC22A7Q9Y694 548 aa24.83■■□□□ 1.57
SHOX2-204ENST00000483851 ACOX3O15254 700 aa24.83■■□□□ 1.56
SHOX2-204ENST00000483851 B3GALT2O43825 422 aa24.83■■□□□ 1.56
SHOX2-204ENST00000483851 SRPX2O60687 465 aaPredicted RBP24.83■■□□□ 1.56
SHOX2-204ENST00000483851 TFAP2AP05549 437 aa24.83■■□□□ 1.56
SHOX2-204ENST00000483851 ST6GAL1P15907 406 aa24.83■■□□□ 1.56
SHOX2-204ENST00000483851 BUD31P41223 144 aaPredicted RBP24.83■■□□□ 1.56
SHOX2-204ENST00000483851 DHPSP49366 369 aaPredicted RBP24.83■■□□□ 1.56
SHOX2-204ENST00000483851 CEBPEQ15744 281 aa24.83■■□□□ 1.56
SHOX2-204ENST00000483851 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.83■■□□□ 1.56
SHOX2-204ENST00000483851 SAMD14Q8IZD0 417 aaPredicted RBP24.83■■□□□ 1.56
SHOX2-204ENST00000483851 CD180Q99467 661 aa24.83■■□□□ 1.56
SHOX2-204ENST00000483851 LYRM4Q9HD34 91 aa24.83■■□□□ 1.56
SHOX2-204ENST00000483851 GIMAP4Q9NUV9 329 aa24.83■■□□□ 1.56
SHOX2-204ENST00000483851 TMEM131Q92545 1883 aa24.83■■□□□ 1.56
SHOX2-204ENST00000483851 MYO1GB0I1T2 1018 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 NUDT21O43809 227 aaKnown RBP24.82■■□□□ 1.56
SHOX2-204ENST00000483851 SDC3O75056 442 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 C1QCP02747 245 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 KDELR2P33947 212 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 CRATP43155 626 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 PPP1CAP62136 330 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 SAXO2Q658L1 398 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 C1orf210Q8IVY1 113 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 SLC30A8Q8IWU4 369 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 CARFQ8N187 725 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 CSNK1A1LQ8N752 337 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 ARL10Q8N8L6 244 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 TFAP2CQ92754 450 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 DPH2Q9BQC3 489 aaPredicted RBP24.82■■□□□ 1.56
SHOX2-204ENST00000483851 ANKRD60Q9BZ19 345 aa24.82■■□□□ 1.56
SHOX2-204ENST00000483851 TNRC6BQ9UPQ9 1833 aaKnown RBP24.82■■□□□ 1.56
SHOX2-204ENST00000483851 RNF103-CHMP3A0A140T963 221 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 FAM149AA5PLN7 773 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 SAC3D1A6NKF1 404 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 RHPN2P1A8MT19 583 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 SERPINA1P01009 418 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 LDLRP01130 860 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 SOAT1P35610 550 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 CBR4Q8N4T8 237 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 PYURFQ96I23 114 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 AMDHD1Q96NU7 426 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 TSC22D3Q99576 134 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 CCDC3Q9BQI4 270 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 BDH2Q9BUT1 245 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 MRPS26Q9BYN8 205 aaKnown RBP24.81■■□□□ 1.56
SHOX2-204ENST00000483851 ENTPD4Q9Y227 616 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 SNX11Q9Y5W9 270 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 FESP07332 822 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 NR2F6P10588 404 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 ELOAQ14241 798 aaKnown RBP24.81■■□□□ 1.56
SHOX2-204ENST00000483851 ZNF630Q2M218 657 aaPredicted RBP24.81■■□□□ 1.56
SHOX2-204ENST00000483851 GCNT6Q5T4J0 391 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 ANGPTL8Q6UXH0 198 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 TMEM64Q6YI46 380 aa24.81■■□□□ 1.56
SHOX2-204ENST00000483851 CLEC4FQ8N1N0 589 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms