RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 UBAP2Q5T6F2 1119 aaKnown RBP16.7■□□□□ 0.26
ATG4B-221ENST00000483778 GRTP1Q5TC63 336 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 HSDL2Q6YN16 418 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 CCDC25Q86WR0 208 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 LAS2Q8IYD9 372 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 ACBD4Q8NC06 268 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 MORN4Q8NDC4 146 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 OR7G3Q8NG95 312 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 FBXO25Q8TCJ0 367 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 SLC2A12Q8TD20 617 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 FBF1Q8TES7 1133 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 ZNF721Q8TF20 911 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 ASB15Q8WXK1 588 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 CDKL2Q92772 493 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 UCN3Q969E3 161 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 PPWD1Q96BP3 646 aaKnown RBP16.7■□□□□ 0.26
ATG4B-221ENST00000483778 SCYL1Q96KG9 808 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 KCNC2Q96PR1 638 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 UCK2Q9BZX2 261 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 SEMA4BQ9NPR2 832 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-221ENST00000483778 HPF1Q9NWY4 346 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 SPG11Q96JI7 2443 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 HMX2A2RU54 273 aa16.69■□□□□ 0.26
ATG4B-221ENST00000483778 C17orf105B2RV13 164 aa16.69■□□□□ 0.26
ATG4B-221ENST00000483778 FGF17O60258 216 aa16.69■□□□□ 0.26
ATG4B-221ENST00000483778 PRKRAO75569 313 aaKnown RBP16.69■□□□□ 0.26
ATG4B-221ENST00000483778 TUBB4AP04350 444 aa16.69■□□□□ 0.26
ATG4B-221ENST00000483778 SPRP35270 261 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-221ENST00000483778 MAGEA4P43358 317 aa16.69■□□□□ 0.26
ATG4B-221ENST00000483778 GUCY2DQ02846 1103 aa16.69■□□□□ 0.26
ATG4B-221ENST00000483778 LAPTM5Q13571 262 aa16.69■□□□□ 0.26
ATG4B-221ENST00000483778 C18orf63Q68DL7 685 aa16.69■□□□□ 0.26
ATG4B-221ENST00000483778 STAG3L4Q8TBR4 150 aa16.69■□□□□ 0.26
ATG4B-221ENST00000483778 TBCDQ9BTW9 1192 aa16.69■□□□□ 0.26
ATG4B-221ENST00000483778 ENKD1Q9H0I2 346 aa16.69■□□□□ 0.26
ATG4B-221ENST00000483778 TNFRSF10DQ9UBN6 386 aa16.69■□□□□ 0.26
ATG4B-221ENST00000483778 LIPGQ9Y5X9 500 aa16.69■□□□□ 0.26
ATG4B-221ENST00000483778 AKAP9Q99996 3911 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 NKX2-6A6NCS4 301 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 SUPT3HB4E1H0 165 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 SUPT3HO75486 399 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 S100BP04271 92 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-221ENST00000483778 CELA3AP09093 270 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 HIST1H1TP22492 207 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-221ENST00000483778 SLAMF1Q13291 335 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 HIST2H2ACQ16777 129 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-221ENST00000483778 DEPDC1Q5TB30 811 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 HIST2H2AA3Q6FI13 130 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 MED27Q6P2C8 311 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 RAPH1Q70E73 1250 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 LRRC70Q7Z2Q7 622 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 MAATS1Q7Z4T9 603 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 CCDC71Q8IV32 467 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-221ENST00000483778 CENPLQ8N0S6 344 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-221ENST00000483778 OR14A16Q8NHC5 309 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 CA5BP1Q8WTZ4 195 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 KCTD4Q8WVF5 259 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 DAZLQ92904 295 aaKnown RBP16.68■□□□□ 0.26
ATG4B-221ENST00000483778 MRRFQ96E11 262 aaKnown RBP16.68■□□□□ 0.26
ATG4B-221ENST00000483778 RNF6Q9Y252 685 aa16.68■□□□□ 0.26
ATG4B-221ENST00000483778 NPIPA2E9PIF3 369 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 NPIPA3F8WFD2 350 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 K7EPI3 171 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 GLSO94925 669 aaPredicted RBP16.67■□□□□ 0.26
ATG4B-221ENST00000483778 SCELO95171 688 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 GSTA2P09210 222 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 CCL3P10147 92 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 CNR1P21554 472 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 CPN2P22792 545 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 DNASE1L1P49184 302 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 HNRNPH2P55795 449 aaKnown RBP16.67■□□□□ 0.26
ATG4B-221ENST00000483778 PLGLB1Q02325 96 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 PCDH1Q08174 1060 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 TGM3Q08188 693 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 PMPCAQ10713 525 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 FOXO1Q12778 655 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 DDX39BQ13838 428 aaKnown RBP16.67■□□□□ 0.26
ATG4B-221ENST00000483778 SLMAPQ14BN4 828 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 AP5B1Q2VPB7 878 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 PAGE2BQ5JRK9 111 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 KHDRBS2Q5VWX1 349 aaKnown RBP16.67■□□□□ 0.26
ATG4B-221ENST00000483778 OR4C11Q6IEV9 310 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 MEX3BQ6ZN04 569 aaKnown RBP16.67■□□□□ 0.26
ATG4B-221ENST00000483778 TEX9Q8N6V9 391 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 OR5M9Q8NGP3 310 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 HUS1BQ8NHY5 278 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 UBTD2Q8WUN7 234 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 SENP5Q96HI0 755 aaPredicted RBP16.67■□□□□ 0.26
ATG4B-221ENST00000483778 SPOCK3Q9BQ16 436 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 TTTY12Q9BZ98 90 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 ZDHHC11Q9H8X9 412 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 NMRAL1Q9HBL8 299 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 NPDC1Q9NQX5 325 aaPredicted RBP16.67■□□□□ 0.26
ATG4B-221ENST00000483778 PNPLA3Q9NST1 481 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 NUDT4Q9NZJ9 180 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 OPTCQ9UBM4 332 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 ITGB1BP2Q9UKP3 347 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 ATG4BQ9Y4P1 393 aa16.67■□□□□ 0.26
ATG4B-221ENST00000483778 PLPP1O14494 284 aa16.66■□□□□ 0.26
ATG4B-221ENST00000483778 KERAO60938 352 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms