RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 GLIPR2Q9H4G4 154 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 SOX17Q9H6I2 414 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-225ENST00000483495 LYARQ9NX58 379 aaKnown RBP12.55□□□□□ -0.4
CPNE1-225ENST00000483495 TMEFF2Q9UIK5 374 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-225ENST00000483495 CES1P1Q9UKY3 287 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 BAG5Q9UL15 447 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 ANGPT4Q9Y264 503 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 SNX11Q9Y5W9 270 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 SLCO1B1Q9Y6L6 691 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 SMIM31A0A1B0GVY4 71 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 KRBA1A5PL33 1030 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 TRIM64CA6NLI5 447 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 C2orf74A8MZ97 194 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 MYO1GB0I1T2 1018 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 PROM1O43490 865 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 CTSVO60911 334 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 AIFM1O95831 613 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 CLIC3O95833 236 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 IFNA14P01570 189 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 SMIM10L1P0DMW3 83 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 NELFEP18615 380 aaKnown RBP12.54□□□□□ -0.4
CPNE1-225ENST00000483495 CERS1P27544 350 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 MAGEA8P43361 318 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 TUBA4AP68366 448 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 PPP1R8Q12972 351 aaKnown RBP12.54□□□□□ -0.4
CPNE1-225ENST00000483495 HSPB3Q12988 150 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 TTC33Q6PID6 262 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-225ENST00000483495 FIGLAQ6QHK4 219 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 CEACAM20Q6UY09 585 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 TMEM64Q6YI46 380 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 TSEN54Q7Z6J9 526 aaKnown RBP12.54□□□□□ -0.4
CPNE1-225ENST00000483495 TAF8Q7Z7C8 310 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 TRIM73Q86UV7 250 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 ZC3H7AQ8IWR0 971 aaKnown RBP12.54□□□□□ -0.4
CPNE1-225ENST00000483495 RBM12BQ8IXT5 1001 aaKnown RBP12.54□□□□□ -0.4
CPNE1-225ENST00000483495 FAM160A2Q8N612 972 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-225ENST00000483495 HORMAD2Q8N7B1 307 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 ARL10Q8N8L6 244 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 SLC37A2Q8TED4 501 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 RLN3Q8WXF3 142 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 SMIM10Q96HG1 83 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 SLC6A18Q96N87 628 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 FCRL4Q96PJ5 515 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 YTHDF1Q9BYJ9 559 aaKnown RBP12.54□□□□□ -0.4
CPNE1-225ENST00000483495 PCED1AQ9H1Q7 454 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 FAM118AQ9NWS6 357 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 NDUFA13Q9P0J0 144 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 WNT16Q9UBV4 365 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 C3orf18Q9UK00 162 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 U3KQV3 271 aa12.54□□□□□ -0.4
CPNE1-225ENST00000483495 GSAPA4D1B5 854 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 M0QX08 132 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 PGRMC2O15173 223 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 VILLO15195 856 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 SLC35G6P0C7Q6 338 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 PRKACGP22612 351 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 NTSP30990 170 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 CCT3P49368 545 aaKnown RBP12.53□□□□□ -0.4
CPNE1-225ENST00000483495 ARHGDIAP52565 204 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 NR1H2P55055 460 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 RAB8AP61006 207 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 CEBPEQ15744 281 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 ZIK1Q3SY52 487 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-225ENST00000483495 ZNF542PQ5EBM4 170 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 REEP3Q6NUK4 255 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 SLC48A1Q6P1K1 146 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 TMEM26Q6ZUK4 368 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 CEP68Q76N32 757 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 OFCC1Q8IZS5 231 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 KCT2Q8NC54 265 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 OR10G6Q8NH81 332 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 UTP15Q8TED0 518 aaKnown RBP12.53□□□□□ -0.4
CPNE1-225ENST00000483495 LZICQ8WZA0 190 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 EPYCQ99645 322 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 TPSD1Q9BZJ3 242 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 AMBRA1Q9C0C7 1298 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 ROGDIQ9GZN7 287 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 THSD1Q9NS62 852 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 THUMPD1Q9NXG2 353 aaKnown RBP12.53□□□□□ -0.4
CPNE1-225ENST00000483495 TUBA8Q9NY65 449 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-225ENST00000483495 SNRNP200O75643 2136 aaKnown RBP12.53□□□□□ -0.4
CPNE1-225ENST00000483495 FAM170BA6NMN3 283 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 METTL12A8MUP2 240 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 PRKRAO75569 313 aaKnown RBP12.53□□□□□ -0.4
CPNE1-225ENST00000483495 TFPTP0C1Z6 253 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 CTSEP14091 401 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 ATP6V1B1P15313 513 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 CD27P26842 260 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 RAD23AP54725 363 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 UBXN2BQ14CS0 331 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 SPDYE7PQ495Y7 208 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 IFI44LQ53G44 452 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 ANKRD34AQ69YU3 496 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 SATL1Q86VE3 508 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 SFTPA2Q8IWL1 248 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 GJD3Q8N144 294 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 ZNF786Q8N393 782 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 METTL25Q8N6Q8 603 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 CADM4Q8NFZ8 388 aa12.53□□□□□ -0.4
CPNE1-225ENST00000483495 SUN3Q8TAQ9 357 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms