RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 ACSL5Q9ULC5 683 aa10.84□□□□□ -0.67
SMPD4-218ENST00000482171 PCDHGA8Q9Y5G5 932 aa10.84□□□□□ -0.67
SMPD4-218ENST00000482171 MITFO75030 526 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-218ENST00000482171 CCNB2O95067 398 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 MATN4O95460 622 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 PTGER1P34995 402 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 RORCP51449 518 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 TARDBPQ13148 414 aaKnown RBP eCLIP10.83□□□□□ -0.68
SMPD4-218ENST00000482171 TUBB3Q13509 450 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 TOMM20Q15388 145 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 CHPT1Q8WUD6 406 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 MAL2Q969L2 176 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 IL21Q9HBE4 155 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 THUMPD1Q9NXG2 353 aaKnown RBP10.83□□□□□ -0.68
SMPD4-218ENST00000482171 VAPAQ9P0L0 249 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 PCDHGA4Q9Y5G9 962 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 PRAMEF33A0A0G2JMD5 474 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 ACOT8O14734 319 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 SLC16A5O15375 505 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 PRAMEF10O60809 474 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 COQ9O75208 318 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 EEDO75530 441 aaKnown RBP10.83□□□□□ -0.68
SMPD4-218ENST00000482171 TNFP01375 233 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 ASGR2P07307 311 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 CD247P20963 164 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 CD9P21926 228 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 SDC2P34741 201 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 ALDH3B2P48448 385 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 RNF144AP50876 292 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-218ENST00000482171 KCNC3Q14003 757 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 LARS2Q15031 903 aaKnown RBP10.83□□□□□ -0.68
SMPD4-218ENST00000482171 DEFB134Q4QY38 66 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 COQ5Q5HYK3 327 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 SMARCD3Q6STE5 483 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 VRK3Q8IV63 474 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 METTL27Q8N6F8 245 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-218ENST00000482171 DTD2Q96FN9 168 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 RDH12Q96NR8 316 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 KCNH6Q9H252 994 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 TAS2R9Q9NYW1 312 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 GPRC5BQ9NZH0 403 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 CA5BQ9Y2D0 317 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 LTBP1Q14766 1721 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 CLDN4O14493 209 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 ORC5O43913 435 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 B4GALT2O60909 372 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 FPR1P21462 350 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 ARRB2P32121 409 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 CLDN8P56748 225 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 AAK1Q2M2I8 961 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 KIAA1614Q5VZ46 1190 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 TUBA3EQ6PEY2 450 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 CHMP1BQ7LBR1 199 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 PHOSPHO2Q8TCD6 241 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 NUDT8Q8WV74 236 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 SLC38A4Q969I6 547 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 SORBS1Q9BX66 1292 aaKnown RBP10.83□□□□□ -0.68
SMPD4-218ENST00000482171 TBC1D17Q9HA65 648 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 CA14Q9ULX7 337 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 PCDHGB3Q9Y5G1 929 aa10.83□□□□□ -0.68
SMPD4-218ENST00000482171 E2F3O00716 465 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 SLC30A4O14863 429 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 AQP9O43315 295 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 STX11O75558 287 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 CDC123O75794 336 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-218ENST00000482171 OR6A2O95222 327 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 HLA-DQA2P01906 255 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 LCKP06239 509 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 NDUFS1P28331 727 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 CLCN7P51798 805 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 CRISP3P54108 245 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 ZNF45Q02386 682 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 APOFQ13790 326 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 WSCD2Q2TBF2 565 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 IQCCQ4KMZ1 466 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 CYBRD1Q53TN4 286 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 ZNF551Q7Z340 670 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-218ENST00000482171 OXR1Q8N573 874 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 Q8N9G6 341 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-218ENST00000482171 C7orf57Q8NEG2 295 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 TTLQ8NG68 377 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 LMX1AQ8TE12 382 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 PMEPA1Q969W9 287 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 TP53INP1Q96A56 240 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 ZNF486Q96H40 463 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-218ENST00000482171 GPR78Q96P69 363 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 ZNF717Q9BY31 904 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-218ENST00000482171 ACPTQ9BZG2 426 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 ANKRA2Q9H9E1 313 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 IL21RQ9HBE5 538 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 PDFQ9HBH1 243 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 DIABLOQ9NR28 239 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 TVP23BQ9NYZ1 205 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 GDE1Q9NZC3 331 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 ZNF24P17028 368 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 C5AR1P21730 350 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 ITGB7P26010 798 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 AOAHP28039 575 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 DPP6P42658 865 aa10.82□□□□□ -0.68
SMPD4-218ENST00000482171 GSTM4Q03013 218 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms