RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 C8orf4Q9NR00 106 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 TXLNGQ9NUQ3 528 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 FAIMQ9NVQ4 179 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.98□□□□□ -0.65
HPS4-212ENST00000481910 SPTBN2O15020 2390 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 A0A0A6YYC8 382 aaPredicted RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 GOLGA8QA0A0J9YX86 632 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 GOLGA8OA6NCC3 632 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 NOTOA8MTQ0 251 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 C4orf51C9J302 202 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 GOLGA8NF8WBI6 632 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 I3L1I5 382 aaPredicted RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 RTCAO00442 366 aaKnown RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 ZNF195O14628 629 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 PEX11AO75192 247 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 RSL1D1O76021 490 aaKnown RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 MED26O95402 600 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 B3GALT4O96024 378 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 HBQ1P09105 142 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 SMIM10L1P0DMW3 83 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 ZNF28P17035 718 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 DDX5P17844 614 aaKnown RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 RBMS1P29558 406 aaKnown RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 GCGRP47871 477 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 TMED10P49755 219 aaKnown RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 AQP5P55064 265 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 ACSM2AQ08AH3 577 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 ATP6AP1LQ52LC2 224 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 ACSM2BQ68CK6 577 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 OR4C11Q6IEV9 310 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 RHBDD2Q6NTF9 364 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 PRSS41Q7RTY9 318 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 MAVSQ7Z434 540 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 UBE3DQ7Z6J8 389 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 DTWD1Q8N5C7 304 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 C1orf52Q8N6N3 182 aaKnown RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 SLC38A9Q8NBW4 561 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 CHTF18Q8WVB6 975 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 IPCEF1Q8WWN9 437 aaPredicted RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 APIPQ96GX9 242 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 SMIM10Q96HG1 83 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 SLC46A1Q96NT5 459 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 TBCDQ9BTW9 1192 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 SORBS1Q9BX66 1292 aaKnown RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 NRSN2Q9GZP1 204 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 WDR55Q9H6Y2 383 aaPredicted RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 COPS7BQ9H9Q2 264 aaPredicted RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 PRDM7Q9NQW5 492 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 DCTN4Q9UJW0 460 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 NAALAD2Q9Y3Q0 740 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 PCDHGA3Q9Y5H0 932 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 A0A088AWK7 358 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 A0A1B0GX78 115 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 C9orf172C9J069 976 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 FOXS1O43638 330 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 GALR3O60755 368 aaPredicted RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 CPNE3O75131 537 aaKnown RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 VPS4BO75351 444 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 SEC24DO94855 1032 aaPredicted RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 SEMA3DO95025 777 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 OXSR1O95747 527 aaPredicted RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 ZNF10P21506 573 aaPredicted RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 EPHA3P29320 983 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 SSR2P43308 183 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 AVPR1BP47901 424 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 ARFIP1P53367 373 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 RAC1P63000 192 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 SF3A3Q12874 501 aaKnown RBP eCLIP10.97□□□□□ -0.65
HPS4-212ENST00000481910 SLC9B1Q4ZJI4 515 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 SPIN4Q56A73 249 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 C1orf189Q5VU69 101 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 EPGNQ6UW88 154 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 CPLX4Q7Z7G2 160 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 METTL4Q8N3J2 472 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 METTL27Q8N6F8 245 aaPredicted RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 OR9A4Q8NGU2 314 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 SGK3Q96BR1 496 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 MMABQ96EY8 250 aaPredicted RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 PPP3R2Q96LZ3 170 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 SECISBP2Q96T21 854 aaKnown RBP10.97□□□□□ -0.65
HPS4-212ENST00000481910 SCNM1Q9BWG6 230 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 ROGDIQ9GZN7 287 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 OCEL1Q9H607 264 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 AKTIPQ9H8T0 292 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 LRTM1Q9HBL6 345 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 C1orf109Q9NX04 203 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 MBD2Q9UBB5 411 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 GIMAP2Q9UG22 337 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 KLK13Q9UKR3 277 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 AK5Q9Y6K8 562 aa10.97□□□□□ -0.65
HPS4-212ENST00000481910 SPTBN4Q9H254 2564 aa10.96□□□□□ -0.65
HPS4-212ENST00000481910 A0A0G2JND7 137 aa10.96□□□□□ -0.65
HPS4-212ENST00000481910 SGK494L7N484 410 aa10.96□□□□□ -0.65
HPS4-212ENST00000481910 SDHDO14521 159 aa10.96□□□□□ -0.65
HPS4-212ENST00000481910 DSCR3O14972 297 aa10.96□□□□□ -0.65
HPS4-212ENST00000481910 STK17BO94768 372 aa10.96□□□□□ -0.65
HPS4-212ENST00000481910 KLHL18O94889 574 aa10.96□□□□□ -0.65
HPS4-212ENST00000481910 OR5F1O95221 314 aa10.96□□□□□ -0.65
HPS4-212ENST00000481910 ECDO95905 644 aaPredicted RBP10.96□□□□□ -0.65
HPS4-212ENST00000481910 GBAP04062 536 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms